RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 RBFOX1Q9NWB1 397 aaKnown RBP13.03□□□□□ -0.32
DDX54-204ENST00000546898 GLS2Q9UI32 602 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 A0A0U1RQK1 487 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 hCG_1809904A0A1W2PP81 198 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PPE2 198 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PR64 198 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 A0A1W2PRV1 198 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 OGG1O15527 345 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 KDM4BO94953 1096 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 HAND1O96004 215 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 FBP1P09467 338 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 PRKACAP17612 351 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 RAB3AP20336 220 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 TAS2R43P59537 309 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 ACSM1Q08AH1 577 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 FOXL1Q12952 345 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 ZNF529Q6P280 563 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 RFT1Q96AA3 541 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 SPACA5Q96QH8 159 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 HMG20AQ9NP66 347 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 NKX1-2Q9UD57 310 aaPredicted RBP13.02□□□□□ -0.33
DDX54-204ENST00000546898 CLEC2DQ9UHP7 191 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 PCDHGB5Q9Y5G0 923 aa13.02□□□□□ -0.33
DDX54-204ENST00000546898 IGKV1-12A0A0C4DH73 117 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 NPFFO15130 113 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 MAGEB3O15480 346 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 ANGPTL7O43827 346 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 IGKV1D-12P01611 117 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 KLRD1Q13241 179 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 KISS1Q15726 138 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 TMEM200BQ69YZ2 307 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 LAIR2Q6ISS4 152 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 CRIP3Q6Q6R5 217 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 GDPD3Q7L5L3 318 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 ZNF485Q8NCK3 441 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 OR4M1Q8NGD0 313 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 PPP1R35Q8TAP8 253 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 TMEM106AQ96A25 262 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 IL36RNQ9UBH0 155 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 SF3B6Q9Y3B4 125 aaKnown RBP13.01□□□□□ -0.33
DDX54-204ENST00000546898 FAM96BQ9Y3D0 163 aa13.01□□□□□ -0.33
DDX54-204ENST00000546898 TMEM82A0PJX8 343 aa13□□□□□ -0.33
DDX54-204ENST00000546898 HAX1O00165 279 aa13□□□□□ -0.33
DDX54-204ENST00000546898 MYL12BO14950 172 aa13□□□□□ -0.33
DDX54-204ENST00000546898 XPNPEP2O43895 674 aa13□□□□□ -0.33
DDX54-204ENST00000546898 LALBAP00709 142 aa13□□□□□ -0.33
DDX54-204ENST00000546898 RBP4P02753 201 aa13□□□□□ -0.33
DDX54-204ENST00000546898 SOX2P48431 317 aa13□□□□□ -0.33
DDX54-204ENST00000546898 EDDM3BP56851 147 aa13□□□□□ -0.33
DDX54-204ENST00000546898 ZP1P60852 638 aa13□□□□□ -0.33
DDX54-204ENST00000546898 RPL15P61313 204 aaKnown RBP13□□□□□ -0.33
DDX54-204ENST00000546898 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
DDX54-204ENST00000546898 ZNF273Q14593 569 aa13□□□□□ -0.33
DDX54-204ENST00000546898 AWAT1Q58HT5 328 aa13□□□□□ -0.33
DDX54-204ENST00000546898 DMKNQ6E0U4 476 aaPredicted RBP13□□□□□ -0.33
DDX54-204ENST00000546898 C17orf107Q6ZR85 190 aa13□□□□□ -0.33
DDX54-204ENST00000546898 AHSA2Q719I0 299 aa13□□□□□ -0.33
DDX54-204ENST00000546898 STX19Q8N4C7 294 aa13□□□□□ -0.33
DDX54-204ENST00000546898 BPIFB6Q8NFQ5 453 aa13□□□□□ -0.33
DDX54-204ENST00000546898 HEXA-AS1Q9H8Q6 139 aa13□□□□□ -0.33
DDX54-204ENST00000546898 EXOSC4Q9NPD3 245 aaKnown RBP13□□□□□ -0.33
DDX54-204ENST00000546898 FKBP14Q9NWM8 211 aa13□□□□□ -0.33
DDX54-204ENST00000546898 ZNRD1Q9P1U0 126 aa13□□□□□ -0.33
DDX54-204ENST00000546898 MEIOCA2RUB1 952 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 SH2D1BO14796 132 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 CCL3L1P16619 93 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 GABRR1P24046 479 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 SAA4P35542 130 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 BMXP51813 675 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 AQP4P55087 323 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 DLX1P56177 255 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 WNT4P56705 351 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 ERVFRD-1P60508 538 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 PPP3R1P63098 170 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 GRK1Q15835 563 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 MIDNQ504T8 468 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 YIF1BQ5BJH7 314 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 ASPHD2Q6ICH7 369 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 HCP5Q6MZN7 132 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 RNF144BQ7Z419 303 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 C11orf42Q8N5U0 333 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 CHIAQ9BZP6 476 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 DPAGT1Q9H3H5 408 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 TAS2R4Q9NYW5 299 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 GSTK1Q9Y2Q3 226 aa12.99□□□□□ -0.33
DDX54-204ENST00000546898 SIRT4Q9Y6E7 314 aaPredicted RBP12.99□□□□□ -0.33
DDX54-204ENST00000546898 TRBV5-5A0A0J9YX44 114 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 hADV38S2A0JD32 116 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 MGST3O14880 152 aa12.98□□□□□ -0.33
DDX54-204ENST00000546898 PAHP00439 452 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms