RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LIX1LQ8IVB5 337 aa10.22□□□□□ -0.77
CCDC38-202ENST00000546386 EMG1Q92979 244 aaKnown RBP10.22□□□□□ -0.77
CCDC38-202ENST00000546386 SPSB1Q96BD6 273 aa10.22□□□□□ -0.77
CCDC38-202ENST00000546386 SYT3Q9BQG1 590 aa10.22□□□□□ -0.77
CCDC38-202ENST00000546386 C7orf50Q9BRJ6 194 aaKnown RBP10.22□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
CCDC38-202ENST00000546386 PIPOXQ9P0Z9 390 aa10.22□□□□□ -0.77
CCDC38-202ENST00000546386 A0A1B0GUH1 482 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 A6NLC8 198 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 SIRPB1O00241 398 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 ARPC4P59998 168 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 SEC61A1P61619 476 aaKnown RBP10.21□□□□□ -0.77
CCDC38-202ENST00000546386 SORDQ00796 357 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 PHLDA2Q53GA4 152 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 IL1F10Q8WWZ1 152 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 PTX4Q96A99 478 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 ZNF175Q9Y473 711 aa10.21□□□□□ -0.77
CCDC38-202ENST00000546386 DISC1C4P0D8 188 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 RGS11O94810 467 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 MELTFP08582 738 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 ZNF44P15621 663 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 CDK10Q15131 360 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 CEACAM21Q3KPI0 293 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 LGALSLQ3ZCW2 172 aaPredicted RBP10.21□□□□□ -0.78
CCDC38-202ENST00000546386 FAM201AQ5SY85 155 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 CD276Q5ZPR3 534 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 OR2W3Q7Z3T1 314 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 OR11L1Q8NGX0 322 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 WNT2BQ93097 391 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 SPSB4Q96A44 273 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 GPR137Q96N19 417 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 DPCDQ9BVM2 203 aaPredicted RBP10.21□□□□□ -0.78
CCDC38-202ENST00000546386 ACTR6Q9GZN1 396 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 PQLC2LA1A4F0 135 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 OR6C65A6NJZ3 312 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 IGHV3-13P01766 116 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 IGHV3-7P01780 117 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 C1QBP02746 253 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 C6orf183Q5T699 404 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 NSUN5P2Q63ZY6 315 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 GFRALQ6UXV0 394 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 DOLPP1Q86YN1 238 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 TGIF2LYQ8IUE0 185 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 TCTE3Q8IZS6 198 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 STEAP2Q8NFT2 490 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 SCPEP1Q9HB40 452 aa10.21□□□□□ -0.78
CCDC38-202ENST00000546386 MEIKINA0A087WXM9 373 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 IGHV1-18A0A0C4DH31 117 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 hCG_1807616A0A1W2PRN6 198 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 PROB1E7EW31 1015 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 TRAPPC2LH3BP13 241 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 CD74P04233 296 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 SCTP09683 121 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 RBM11P57052 281 aaKnown RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 LY6DQ14210 128 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 AADACL3Q5VUY0 350 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 OR2AK2Q8NG84 335 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 OR8H1Q8NGG4 311 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 OR5P3Q8WZ94 311 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 WASF3Q9UPY6 502 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 AHRRA9YTQ3 701 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 TNFSF12O43508 249 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 CHATP28329 748 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 ZNF154Q13106 437 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 IGFL3Q6UXB1 125 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 BHLHA15Q7RTS1 189 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 SCCPDHQ8NBX0 429 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 TERB2Q8NHR7 220 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 NANOS1Q8WY41 292 aaKnown RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 ADAT1Q9BUB4 502 aaKnown RBP10.2□□□□□ -0.78
CCDC38-202ENST00000546386 RGCCQ9H4X1 137 aa10.2□□□□□ -0.78
CCDC38-202ENST00000546386 ARFGEF3Q5TH69 2177 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 TIMM8AO60220 97 aaPredicted RBP10.19□□□□□ -0.78
CCDC38-202ENST00000546386 CGAP01215 116 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 HOXB5P09067 269 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 OR5H8P0DN80 308 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 CAPZA1P52907 286 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 ASCC1Q8N9N2 400 aaKnown RBP10.19□□□□□ -0.78
CCDC38-202ENST00000546386 ELMOD3Q96FG2 381 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 PPA2Q9H2U2 334 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 GPN1Q9HCN4 374 aaPredicted RBP10.19□□□□□ -0.78
CCDC38-202ENST00000546386 GP6Q9HCN6 339 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 PLSCR4Q9NRQ2 329 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 GSKIPQ9P0R6 139 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 A0A0G2JNJ9 132 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 ATP6V1G2-DDX39BF2Z307 99 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 SULT1C2O00338 296 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 MLNRO43193 412 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 NXPH3O95157 252 aa10.19□□□□□ -0.78
CCDC38-202ENST00000546386 CFDP00746 253 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms