RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 METTL17Q9H7H0 456 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 TCF7L1Q9HCS4 588 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 EXOSC4Q9NPD3 245 aaKnown RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 RNF7Q9UBF6 113 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 STUB1Q9UNE7 303 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 FOXJ3Q9UPW0 622 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 HIVEP2P31629 2446 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ARHGAP32A7KAX9 2087 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 LOC100506127A0A0U1RQW1 187 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 TRDV1A0A1B0GX56 115 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 OOEPA6NGQ2 149 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 H7C1Q1 480 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 LGALS8O00214 317 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 WNT9BO14905 357 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 AKR7A2O43488 359 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 GPX5O75715 221 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 NXPH2O95156 264 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 FSTL3O95633 263 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 CYB5AP00167 134 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 MAS1P04201 325 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ALDOBP05062 364 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ADRA2CP18825 462 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 GLRA1P23415 457 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 GADD45AP24522 165 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 MYL9P24844 172 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF93P35789 620 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 MDH2P40926 338 aaKnown RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 OR3A4PP47883 348 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ZP1P60852 638 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 GMFBP60983 142 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 PDZK1IP1Q13113 114 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 KCNJ8Q15842 424 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF404Q494X3 552 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM155Q4W5P6 130 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 TEX36Q5VZQ5 186 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 C22orf42Q6IC83 251 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 CRIP3Q6Q6R5 217 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 UNQ9370/PRO34162Q6UXP9 181 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 SPNS3Q6ZMD2 512 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 RNF144BQ7Z419 303 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 LRRTM1Q86UE6 522 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ANGPTL5Q86XS5 388 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 Q8IYB0 196 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 BATF2Q8N1L9 274 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 SPICQ8N5J4 248 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 JAGN1Q8N5M9 183 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 PNLDC1Q8NA58 520 aaKnown RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 C19orf18Q8NEA5 215 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 TNFAIP8L1Q8WVP5 186 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 SLAMF9Q96A28 289 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 CEP19Q96LK0 163 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF488Q96MN9 340 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 GPER1Q99527 375 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 NKX3-1Q99801 234 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 CHCHD6Q9BRQ6 235 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 WDR13Q9H1Z4 485 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 OR51E2Q9H255 320 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 SNTG1Q9NSN8 517 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 TXNL4BQ9NX01 149 aaKnown RBP5.29□□□□□ -1.56
PRKDC-211ENST00000546304 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 NAV3Q8IVL0 2385 aa5.29□□□□□ -1.56
PRKDC-211ENST00000546304 PPIAL4EA0A075B759 164 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 IGHV3OR15-7A0A075B7D8 119 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 TRAV38-1A0A0B4J264 116 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 IGKV1-12A0A0C4DH73 117 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 NKX6-3A6NJ46 265 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 CEACAM18A8MTB9 384 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 PPIAL4DF5H284 164 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 TRAPPC2LH3BP13 241 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ANGPTL7O43827 346 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 NOS1APO75052 506 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 KDM4BO94953 1096 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 LHBP01229 141 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 IGKV1D-12P01611 117 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 IGHV2-5P01817 119 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 TFAP2AP05549 437 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 PPIAL4FP0DN26 164 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 RPS2P15880 293 aaKnown RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 MUC1P15941 1255 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SRMP19623 302 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 BCL3P20749 454 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 USF1P22415 310 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 FGF9P31371 208 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ALDH3B2P48448 385 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ERVK11-1P61568 191 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 LOXL1Q08397 574 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 MICBQ29980 383 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 STUMQ69YW2 141 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 AWAT2Q6E213 333 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SFRP4Q6FHJ7 346 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-211ENST00000546304 ACP7Q6ZNF0 438 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 GPR141Q7Z602 305 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 SATL1Q86VE3 508 aa5.28□□□□□ -1.56
PRKDC-211ENST00000546304 MKXQ8IYA7 352 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms