RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 K7EPK0 472 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TIAF1O95411 115 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 DTYMKP23919 212 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 HOXA6P31267 233 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 CD96P40200 585 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 MAGEB1P43366 347 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 THSD4Q6ZMP0 1018 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TMPRSS11FQ6ZWK6 438 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 FAM71E2Q8N5Q1 922 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 KCTD12Q96CX2 325 aaKnown RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 GRAMD2BQ96HH9 432 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 PECRQ9BY49 303 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 PBOV1Q9GZY1 135 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 OPN3Q9H1Y3 402 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 C19orf12Q9NSK7 152 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 TAS2R4Q9NYW5 299 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 B9D1Q9UPM9 204 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 LAMP3Q9UQV4 416 aa7.62□□□□□ -1.19
CLIP1-218ENST00000545889 MRPS18BQ9Y676 258 aaKnown RBP7.62□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF320A2RRD8 509 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 CSRP1P21291 193 aaKnown RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 NPY4RP50391 375 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 TMEM267Q0VDI3 215 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 Q56UQ5 140 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 ACSM5Q6NUN0 579 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 APOOLQ6UXV4 268 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 SLC38A9Q8NBW4 561 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 OR5D13Q8NGL4 314 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 ISOC2Q96AB3 205 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 CMBLQ96DG6 245 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 IL17BQ9UHF5 180 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 ING1Q9UK53 422 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 OTOGLQ3ZCN5 2332 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DBX1A6NMT0 343 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF785A8K8V0 405 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 M0R1X1 148 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 PAX6P26367 422 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 BPIFB3P59826 476 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 PRICKLE4Q2TBC4 344 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 NHLRC3Q5JS37 347 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 LRFN3Q9BTN0 628 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DMRT1Q9Y5R6 373 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 A8MXK9 166 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 FBXO24O75426 580 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 NXPH3O95157 252 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 HPXP02790 462 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 PATE4P0C8F1 98 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 CCL2P13500 99 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 PSMB1P20618 241 aaKnown RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 IAH1Q2TAA2 248 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF774Q6NX45 483 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DGAT2L6Q6ZPD8 337 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 SHISA5Q8N114 240 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 NPEPL1Q8NDH3 523 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 AICDAQ9GZX7 198 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 AKIRIN1Q9H9L7 192 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 TREM2Q9NZC2 230 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 GNG13Q9P2W3 67 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 TP53BP1Q12888 1972 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DVL1O14640 695 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 NGFP01138 241 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 FGF2P09038 288 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 LIFP15018 202 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 CXCL2P19875 107 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 RAB4AP20338 218 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 MPGP29372 298 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 SLC6A1P30531 599 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DVL1P1P54792 670 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 PCBP3P57721 371 aaKnown RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 AARDQ4LEZ3 155 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 DYNLRB2Q8TF09 96 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 GTF3AQ92664 365 aaKnown RBP7.61□□□□□ -1.19
CLIP1-218ENST00000545889 MMP25Q9NPA2 562 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 SLC22A13Q9Y226 551 aa7.61□□□□□ -1.19
CLIP1-218ENST00000545889 AHRRA9YTQ3 701 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 PPP1R2P9O14990 202 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 SEMA7AO75326 666 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 TBX6O95947 436 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-218ENST00000545889 CRYBB2P43320 205 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 RPS27AP62979 156 aaKnown RBP7.6□□□□□ -1.19
CLIP1-218ENST00000545889 UBA52P62987 128 aaKnown RBP7.6□□□□□ -1.19
CLIP1-218ENST00000545889 FOXO1Q12778 655 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF74Q16587 644 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 NHLRC1Q6VVB1 395 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 CALHM3Q86XJ0 350 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 OR2L13Q8N349 312 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 PP6455Q8WZ26 134 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 GGACTQ9BVM4 153 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 CISD1Q9NZ45 108 aaKnown RBP7.6□□□□□ -1.19
CLIP1-218ENST00000545889 PLEKHB1Q9UF11 243 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-218ENST00000545889 SCN8AQ9UQD0 1980 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 H3BMH7 237 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 LANCL1O43813 399 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 SRMP19623 302 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 AADACP22760 399 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 ECI1P42126 302 aa7.6□□□□□ -1.19
CLIP1-218ENST00000545889 LGALS7P47929 136 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms