RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	POMT1	Q9Y6A1	747 aa		6.3	□□□□□ -1.4
SNHG1-223	ENST00000545440	SLC1A7	O00341	560 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	SYNGR1	O43759	233 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	ENTPD6	O75354	484 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	NXPH2	O95156	264 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	MELTF	P08582	738 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	NDUFB7	P17568	137 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	GABRB1	P18505	474 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	KIR3DL2	P43630	455 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	GABRA2	P47869	451 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	IL24	Q13007	206 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	ODF4	Q2M2E3	257 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	TP53I3	Q53FA7	332 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	C16orf87	Q6PH81	154 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	C1orf122	Q6ZSJ8	110 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	KCTD20	Q7Z5Y7	419 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	CALHM1	Q8IU99	346 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	ACBD7	Q8N6N7	88 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440		Q8N7P7	452 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNRF1	Q8ND25	227 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	TMEM185A	Q8NFB2	350 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	OR2G2	Q8NGZ5	317 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	NPRL2	Q8WTW4	380 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	SSMEM1	Q8WWF3	244 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	PP6455	Q8WZ26	134 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	MBOAT4	Q96T53	435 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	MYCBP	Q99417	103 aa	Predicted RBP	6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	C1orf43	Q9BWL3	253 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	FAM234A	Q9H0X4	552 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	METTL8	Q9H825	291 aa	Known RBP	6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	S100A14	Q9HCY8	104 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	SIRT7	Q9NRC8	400 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	SLC7A11	Q9UPY5	501 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	CAB39	Q9Y376	341 aa	Predicted RBP	6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	MAB21L2	Q9Y586	359 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	GMPPB	Q9Y5P6	360 aa		6.29	□□□□□ -1.4
SNHG1-223	ENST00000545440	TET2	Q6N021	2002 aa	Predicted RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		A0A0U1RQK1	487 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		A0A1B0GUS0	222 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		A0A1W2PPH5	198 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		A0A1W2PQ09	198 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	DAPL1	A0PJW8	107 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		A6NIN4	97 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	RFPL4A	A6NLU0	287 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNF785	A8K8V0	405 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	RFPL4AL1	F8VTS6	287 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	RNASEK-C17orf49	H0YIS7	233 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	TFF1	P04155	84 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ISG15	P05161	165 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	FBP1	P09467	338 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	DBT	P11182	482 aa	Known RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	EEF1B2	P24534	225 aa	Known RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	CCR9	P51686	369 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ERVK11-1	P61568	191 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNF91	Q05481	1191 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	BLMH	Q13867	455 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	UBE2V2	Q15819	145 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZSCAN26	Q16670	478 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZIK1	Q3SY52	487 aa	Predicted RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	TMEM244	Q5VVB8	128 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	UTS2B	Q765I0	119 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	EGFL6	Q8IUX8	553 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ENTHD1	Q8IYW4	607 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	SYS1	Q8N2H4	156 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	CD177	Q8N6Q3	437 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	DNAAF1	Q8NEP3	725 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	OR5D13	Q8NGL4	314 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	SGMS2	Q8NHU3	365 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	TRMT10A	Q8TBZ6	339 aa	Known RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	DYRK2	Q92630	601 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	TNFRSF14	Q92956	283 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	MRPL48	Q96GC5	212 aa	Known RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNF488	Q96MN9	340 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440		Q96MT0	163 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	RDH12	Q96NR8	316 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNF747	Q9BV97	191 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	CHIA	Q9BZP6	476 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ELL3	Q9HB65	397 aa	Predicted RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	INPP5E	Q9NRR6	644 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	ZNRD1	Q9P1U0	126 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	EXOG	Q9Y2C4	368 aa	Known RBP	6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	MMP24	Q9Y5R2	645 aa		6.28	□□□□□ -1.4
SNHG1-223	ENST00000545440	NBEAL1	Q6ZS30	2694 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	WNK1	Q9H4A3	2382 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	IGKV1-27	A0A075B6S5	117 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	LOC100130705	A0A1B0GUX0	176 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FAM230A	A0A1W2PPH8	454 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	NPFF	O15130	113 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	NDUFA7	O95182	113 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FADS2	O95864	444 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	SERPINA3	P01011	423 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	RPSA	P08865	295 aa	Known RBP	6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	HTR1A	P08908	422 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	PRDX2	P32119	198 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	IER3	P46695	156 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	RBP2	P50120	134 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	UBE2E1	P51965	193 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	FUT6	P51993	359 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	CAPZA1	P52907	286 aa		6.27	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR12D2	P58182	307 aa		6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms