RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	OR5AK2	Q8NH90	309 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	EMG1	Q92979	244 aa	Known RBP	10.93	□□□□□ -0.66
POLE-222	ENST00000545015	MEGF9	Q9H1U4	602 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	ZCCHC4	Q9H5U6	513 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	ZNF696	Q9H7X3	374 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	BEX1	Q9HBH7	125 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	HMG20A	Q9NP66	347 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	RBFOX1	Q9NWB1	397 aa	Known RBP	10.93	□□□□□ -0.66
POLE-222	ENST00000545015	HSPE1-MOB4	S4R3N1	261 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	NBEAL1	Q6ZS30	2694 aa		10.93	□□□□□ -0.66
POLE-222	ENST00000545015	IGKV1-12	A0A0C4DH73	117 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	TMEM82	A0PJX8	343 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	MEIOC	A2RUB1	952 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	CASQ2	O14958	399 aa	Predicted RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	HAND1	O96004	215 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	IGKV1D-12	P01611	117 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	LMO1	P25800	156 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	ERP29	P30040	261 aa	Known RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	ERVFRD-1	P60508	538 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	SMN1	Q16637	294 aa	Known RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	PRR31	Q5SQ13	230 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	RPL22L1	Q6P5R6	122 aa	Known RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	BATF2	Q8N1L9	274 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	ASCC1	Q8N9N2	400 aa	Known RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	SETD9	Q8NE22	299 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	OR4M1	Q8NGD0	313 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	OR13C9	Q8NGT0	318 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	PDCD1LG2	Q9BQ51	273 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	COMMD4	Q9H0A8	199 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	VPREB3	Q9UKI3	123 aa		10.92	□□□□□ -0.66
POLE-222	ENST00000545015	DIMT1	Q9UNQ2	313 aa	Known RBP	10.92	□□□□□ -0.66
POLE-222	ENST00000545015	CLPSL1	A2RUU4	121 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	FAM90A8P	A6NJQ4	464 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	SULT1B1	O43704	296 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	PAH	P00439	452 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	ZNF728	P0DKX0	622 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	CCL3L1	P16619	93 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	BCL3	P20749	454 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	PEX2	P28328	305 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	POU3F4	P49335	361 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	ZP1	P60852	638 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	PRB3	Q04118	309 aa	Predicted RBP	10.91	□□□□□ -0.66
POLE-222	ENST00000545015	RCN1	Q15293	331 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.91	□□□□□ -0.66
POLE-222	ENST00000545015	OLFML2A	Q68BL7	652 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	GDPD3	Q7L5L3	318 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	TCF23	Q7RTU1	214 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	PNKD	Q8N490	385 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	DHRSX	Q8N5I4	330 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	C16orf95	Q9H693	158 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	TNFRSF19	Q9NS68	423 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	IL36RN	Q9UBH0	155 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	GLS2	Q9UI32	602 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	DHDH	Q9UQ10	334 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	LINC00312	Q9Y6C7	94 aa		10.91	□□□□□ -0.66
POLE-222	ENST00000545015	hADV38S2	A0JD32	116 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	BTBD17	A6NE02	478 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	MGST3	O14880	152 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	OGG1	O15527	345 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	SPRY1	O43609	319 aa	Predicted RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	ANGPTL7	O43827	346 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	PSPN	O60542	156 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	TSPAN9	O75954	239 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	CLIC3	O95833	236 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	CSN2	P05814	226 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	PIP	P12273	146 aa	Predicted RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	PRKACA	P17612	351 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	ETV1	P50549	477 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	GTF2A1	P52655	376 aa	Predicted RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	CDK5R1	Q15078	307 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	KISS1	Q15726	138 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	TMPRSS11A	Q6ZMR5	421 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	RNF144B	Q7Z419	303 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	ZNF485	Q8NCK3	441 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015		Q8NFD4	153 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	PXT1	Q8NFP0	134 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	OR11H6	Q8NGC7	330 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	OR52N4	Q8NGI2	321 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	OR52N1	Q8NH53	320 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	PPP1R35	Q8TAP8	253 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	CNIH3	Q8TBE1	160 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	FBLIM1	Q8WUP2	373 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	WFDC12	Q8WWY7	111 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	RGP1	Q92546	391 aa	Predicted RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	TAF15	Q92804	592 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	CPNE2	Q96FN4	548 aa	Predicted RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015	BABAM2	Q9NXR7	383 aa		10.9	□□□□□ -0.66
POLE-222	ENST00000545015	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.9	□□□□□ -0.66
POLE-222	ENST00000545015		A0A1W2PRD5	423 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015		A0A1W2PRF3	423 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015		A0A1W2PRM7	423 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	VGLL3	A8MV65	326 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	ODF3B	A8MYP8	253 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	SH2D1B	O14796	132 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	CLPX	O76031	633 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	ALDOB	P05062	364 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	OCM2	P0CE71	109 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	OCM	P0CE72	109 aa	Predicted RBP	10.89	□□□□□ -0.67
POLE-222	ENST00000545015	IGHV1-8	P0DP01	117 aa		10.89	□□□□□ -0.67
POLE-222	ENST00000545015	OMG	P23515	440 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms