RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PDCD1LG2Q9BQ51 273 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 BABAM2Q9NXR7 383 aa9.69□□□□□ -0.86
HDAC4-216ENST00000544989 hADV38S2A0JD32 116 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 RNASEK-C17orf49H0YIS7 233 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 H0YJX3 145 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 KDM4BO94953 1096 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 CLIC3O95833 236 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 HAND1O96004 215 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 TFF1P04155 84 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 HCKP08631 526 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 RAB3AP20336 220 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 CFPP27918 469 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 ETV1P50549 477 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 CDK5R1Q15078 307 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 AWAT1Q58HT5 328 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM200BQ69YZ2 307 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 GDPGP1Q6ZNW5 385 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 CHST4Q8NCG5 386 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 OR10AC1Q8NH08 325 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 OR5R1Q8NH85 324 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 DYRK2Q92630 601 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 THRSPQ92748 146 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 SMIM19Q96E16 107 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 DUX5Q96PT3 197 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 VCX3BQ9H321 246 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 ELL3Q9HB65 397 aaPredicted RBP9.68□□□□□ -0.86
HDAC4-216ENST00000544989 C19orf12Q9NSK7 152 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 PLCXD1Q9NUJ7 323 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
HDAC4-216ENST00000544989 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 MDFIC2A0A1B0GVS7 189 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 E9PI62 339 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 MGST3O14880 152 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 OGG1O15527 345 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF737O75373 536 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 PRKACAP17612 351 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 BCL3P20749 454 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 GABRR1P24046 479 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 ERP29P30040 261 aaKnown RBP9.67□□□□□ -0.86
HDAC4-216ENST00000544989 IER3P46695 156 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 CEBPDP49716 269 aaPredicted RBP9.67□□□□□ -0.86
HDAC4-216ENST00000544989 PPP3R1P63098 170 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 SLC34A1Q06495 639 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 ST3GAL4Q11206 333 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 KISS1Q15726 138 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 PDZD9Q8IXQ8 264 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 OR4F5Q8NH21 305 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 SGMS2Q8NHU3 365 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 RPS4Y2Q8TD47 263 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 HMG20AQ9NP66 347 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 EXOSC4Q9NPD3 245 aaKnown RBP9.67□□□□□ -0.86
HDAC4-216ENST00000544989 RBFOX1Q9NWB1 397 aaKnown RBP9.67□□□□□ -0.86
HDAC4-216ENST00000544989 ZNRD1Q9P1U0 126 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 CKLFQ9UBR5 152 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 MMP24Q9Y5R2 645 aa9.67□□□□□ -0.86
HDAC4-216ENST00000544989 F8VVB4 439 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 F8VWA3 439 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 MYL12BO14950 172 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 SPRY1O43609 319 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ANGPTL7O43827 346 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 NDUFA7O95182 113 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ALDOBP05062 364 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF728P0DKX0 622 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM225BP0DP42 221 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 SAA4P35542 130 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 MTNR1BP49286 362 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 LGALS4P56470 323 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 EDDM3BP56851 147 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 GRK1Q15835 563 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 AANATQ16613 207 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 YIF1BQ5BJH7 314 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF529Q6P280 563 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 BATF2Q8N1L9 274 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 PXT1Q8NFP0 134 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 OR4M1Q8NGD0 313 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 OR13D1Q8NGV5 346 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 FBLIM1Q8WUP2 373 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 TFAP2CQ92754 450 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 GGHQ92820 318 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM106AQ96A25 262 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 GPER1Q99527 375 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 ZNF747Q9BV97 191 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 BEX1Q9HBH7 125 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 PCDHB16Q9NRJ7 776 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 PAK1IP1Q9NWT1 392 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-216ENST00000544989 SOX21Q9Y651 276 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-216ENST00000544989 LINC00312Q9Y6C7 94 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 TRRAPQ9Y4A5 3859 aa9.66□□□□□ -0.86
HDAC4-216ENST00000544989 FAM181BA6NEQ2 426 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 C17orf98A8MV24 154 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 INMTO95050 263 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 CD1AP06126 327 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 LMO1P25800 156 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 NPBWR2P48146 333 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 GTF2A1P52655 376 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms