RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
PDZD4-209ENST00000544474 GPR173Q9NS66 373 aa11.3□□□□□ -0.6
PDZD4-209ENST00000544474 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ZNF264O43296 627 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
PDZD4-209ENST00000544474 CIDEAO60543 219 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 CDC14BO60729 498 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 JTBO76095 146 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 CTSEP14091 401 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 FCARP24071 287 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 RPL23AP62750 156 aaKnown RBP11.29□□□□□ -0.6
PDZD4-209ENST00000544474 FAM189A2Q15884 450 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 VSTM2LQ96N03 204 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 GNRHR2Q96P88 292 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 WNT16Q9UBV4 365 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 NBEAQ8NFP9 2946 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 MEGF11A6BM72 1044 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 DHRS7CA6NNS2 312 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 NXPH2O95156 264 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 IL2RAP01589 272 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 SHHQ15465 462 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 FBXW9Q5XUX1 488 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ADPRHL1Q8NDY3 354 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 TSLPQ969D9 159 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 SLC17A5Q9NRA2 495 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 TUBG2Q9NRH3 451 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 C20orf202A1L168 122 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
PDZD4-209ENST00000544474 CDKN1BP46527 198 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ERVS71-1P61550 626 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 UBALD1Q8TB05 177 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 BAHD1Q8TBE0 780 aaPredicted RBP11.29□□□□□ -0.6
PDZD4-209ENST00000544474 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
PDZD4-209ENST00000544474 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 DOCK11Q5JSL3 2073 aa11.29□□□□□ -0.6
PDZD4-209ENST00000544474 PRSS37A4D1T9 235 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 RAD51DO75771 328 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 SFT2D2O95562 160 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 TK1P04183 234 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 GP1BBP13224 206 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 COL9A1P20849 921 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 EGR4Q05215 589 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 ADIRFQ15847 76 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 C11orf42Q8N5U0 333 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 OR11L1Q8NGX0 322 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.28□□□□□ -0.6
PDZD4-209ENST00000544474 GPX7Q96SL4 187 aaPredicted RBP11.28□□□□□ -0.6
PDZD4-209ENST00000544474 YBX2Q9Y2T7 364 aaKnown RBP11.28□□□□□ -0.6
PDZD4-209ENST00000544474 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 A0A0J9YY10 115 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 TNFSF14O43557 240 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 UTS2O95399 124 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 OR5AC1P0C628 307 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 ZNF16P17020 682 aaPredicted RBP11.28□□□□□ -0.6
PDZD4-209ENST00000544474 PIGPP57054 158 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 SERINC1Q9NRX5 453 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 IRF2P14316 349 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 SELEP16581 610 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 ZNF708P17019 499 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 VAMP2P63027 116 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 H3F3AP84243 136 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 GPR84Q9NQS5 396 aa11.28□□□□□ -0.6
PDZD4-209ENST00000544474 IGHV3-64DA0A0J9YX35 117 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.6
PDZD4-209ENST00000544474 SSSCA1O60232 199 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 CT45A8P0DMV1 189 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 CT45A9P0DMV2 189 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.6
PDZD4-209ENST00000544474 PTTG1IPP53801 180 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 CT45A2Q5DJT8 189 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 EMC4Q5J8M3 183 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 ZDHHC22Q8N966 263 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 OR13G1Q8NGZ3 307 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 HLA-CQ95604 372 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 GLRX2Q9NS18 164 aa11.27□□□□□ -0.6
PDZD4-209ENST00000544474 LOC400499M0QZD8 3231 aa11.27□□□□□ -0.61
PDZD4-209ENST00000544474 RER1O15258 196 aa11.27□□□□□ -0.61
PDZD4-209ENST00000544474 ZNF217O75362 1048 aa11.27□□□□□ -0.61
PDZD4-209ENST00000544474 OR5H8P0DN80 308 aa11.27□□□□□ -0.61
PDZD4-209ENST00000544474 FCGR2AP12318 317 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms