RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CISD1Q9NZ45 108 aaKnown RBP25.75■■□□□ 1.71
CCM2-219ENST00000544363 IL19Q9UHD0 177 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 CENPXA8MT69 81 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 CSF1P09603 554 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 FUT3P21217 361 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 TNFSF4P23510 183 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 ARFRP1Q13795 201 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 DIRC2Q96SL1 478 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 C1orf123Q9NWV4 160 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 ICE1Q9Y2F5 2266 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 NXPH2O95156 264 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 ADH4P08319 380 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 TNFAIP6P98066 277 aaPredicted RBP25.74■■□□□ 1.71
CCM2-219ENST00000544363 ZNF672Q499Z4 452 aaPredicted RBP25.74■■□□□ 1.71
CCM2-219ENST00000544363 ITLN1Q8WWA0 313 aa25.74■■□□□ 1.71
CCM2-219ENST00000544363 C3orf80F5H4A9 247 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 M0R233 179 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 EFNB3Q15768 340 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 SPRNQ5BIV9 151 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 CCBE1Q6UXH8 406 aaPredicted RBP25.73■■□□□ 1.71
CCM2-219ENST00000544363 DEDD2Q8WXF8 326 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 DHRS9Q9BPW9 319 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 FAAP24Q9BTP7 215 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 HES4Q9HCC6 221 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 HRASLSQ9HDD0 168 aa25.73■■□□□ 1.71
CCM2-219ENST00000544363 SPTBN1Q01082 2364 aaKnown RBP25.72■■□□□ 1.71
CCM2-219ENST00000544363 C17orf100A8MU93 164 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 C19orf84I3L1E1 186 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 GATA4P43694 442 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 ENKURQ8TC29 256 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 FAM222BQ8WU58 562 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 SULT4A1Q9BR01 284 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 FN3KRPQ9HA64 309 aa25.72■■□□□ 1.71
CCM2-219ENST00000544363 ZNF107Q9UII5 783 aaPredicted RBP25.72■■□□□ 1.71
CCM2-219ENST00000544363 hCG_1807616A0A1W2PRN6 198 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 H3BUI4 141 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 TPD52L2O43399 206 aaKnown RBP25.71■■□□□ 1.71
CCM2-219ENST00000544363 FCER2P06734 321 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 DUSP1P28562 367 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 RCVRNP35243 200 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 IKZF1Q13422 519 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 ATAD3CQ5T2N8 411 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 TMEM229BQ8NBD8 167 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 OR10Z1Q8NGY1 313 aa25.71■■□□□ 1.71
CCM2-219ENST00000544363 RCC2Q9P258 522 aaKnown RBP25.71■■□□□ 1.71
CCM2-219ENST00000544363 B9A039 149 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 IGFBP2P18065 325 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 CFHR2P36980 270 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 PMELP40967 661 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 CBX5P45973 191 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 GMFBP60983 142 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 GVQW1Q8N7I0 195 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 OCSTAMPQ9BR26 566 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 IFT46Q9NQC8 304 aa25.7■■□□□ 1.71
CCM2-219ENST00000544363 FAM240BA0A1B0GVZ2 78 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 MT-ND4P03905 459 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 CD55P08174 381 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 BTCP35070 178 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 TAS2R19P59542 299 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 MST1LQ2TV78 715 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 BRICD5Q6PL45 260 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 MOGAT3Q86VF5 341 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 LRRC29Q8WV35 223 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 AK3Q9UIJ7 227 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 ANAPC10Q9UM13 185 aa25.7■■□□□ 1.7
CCM2-219ENST00000544363 CHD3Q12873 2000 aaKnown RBP25.69■■□□□ 1.7
CCM2-219ENST00000544363 NAP1L6A6NFF2 107 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 GLRA1P23415 457 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 SLC6A1P30531 599 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 FIP1L1Q6UN15 594 aaKnown RBP25.69■■□□□ 1.7
CCM2-219ENST00000544363 DUSP18Q8NEJ0 188 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 IFT22Q9H7X7 185 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 SPACA1Q9HBV2 294 aa25.69■■□□□ 1.7
CCM2-219ENST00000544363 ROS1P08922 2347 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 WNT9BO14905 357 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 AKAIN1P0CW23 69 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 ZNF146Q15072 292 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 SPIN3Q5JUX0 258 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 FBXW5Q969U6 566 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 WDR13Q9H1Z4 485 aa25.68■■□□□ 1.7
CCM2-219ENST00000544363 CD3DP04234 171 aa25.67■■□□□ 1.7
CCM2-219ENST00000544363 FAUP35544 74 aaKnown RBP25.67■■□□□ 1.7
CCM2-219ENST00000544363 Q6P435 159 aa25.67■■□□□ 1.7
CCM2-219ENST00000544363 ACP7Q6ZNF0 438 aa25.67■■□□□ 1.7
CCM2-219ENST00000544363 ERGIC1Q969X5 290 aa25.67■■□□□ 1.7
CCM2-219ENST00000544363 UBE2QL1A1L167 161 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 NAT1P18440 290 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 FAM209AQ5JX71 171 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 STEAP1BQ6NZ63 245 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 CMSS1Q9BQ75 279 aaKnown RBP25.66■■□□□ 1.7
CCM2-219ENST00000544363 MS4A5Q9H3V2 200 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 GCM1Q9NP62 436 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 DYNLRB1Q9NP97 96 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 RASL12Q9NYN1 266 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 NLKQ9UBE8 527 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 PLEKHA6Q9Y2H5 1048 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 SRRM5B3KS81 715 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 ZNF736B4DX44 427 aaPredicted RBP25.66■■□□□ 1.7
CCM2-219ENST00000544363 DEGS1O15121 323 aa25.66■■□□□ 1.7
CCM2-219ENST00000544363 MRPS15P82914 257 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms