RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CTSDP07339 412 aaPredicted RBP11.09□□□□□ -0.63
SMG8-202ENST00000543872 DUSP1P28562 367 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 CARD18P57730 90 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 VAMP2P63027 116 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 HERPUD1Q15011 391 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 ZNF774Q6NX45 483 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 OR11L1Q8NGX0 322 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 PHF1O43189 567 aaPredicted RBP11.09□□□□□ -0.63
SMG8-202ENST00000543872 TNFSF14O43557 240 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
SMG8-202ENST00000543872 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
SMG8-202ENST00000543872 ZNF728P0DKX0 622 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 SELEP16581 610 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 OR5C1Q8NGR4 320 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 BAHD1Q8TBE0 780 aaPredicted RBP11.09□□□□□ -0.63
SMG8-202ENST00000543872 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 GPR173Q9NS66 373 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 ANAPC10Q9UM13 185 aa11.09□□□□□ -0.63
SMG8-202ENST00000543872 ZNF705FA8MVS1 300 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 C17orf105B2RV13 164 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 PLPP3O14495 311 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF705DP0CH99 300 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF705BP0CI00 300 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 ANOS1P23352 680 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 CSNK1A1P48729 337 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG8-202ENST00000543872 VHLLQ6RSH7 139 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 Q8NFD4 153 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 OR2AJ1Q8NGZ0 328 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 RNF133Q8WVZ7 376 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 LIN37Q96GY3 246 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 ADGRG7Q96K78 797 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 LIME1Q9H400 295 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 IGSF23A1L1A6 192 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 POLR2HP52434 150 aaKnown RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF266Q14584 549 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 TMEM187Q14656 261 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ADIRFQ15847 76 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 LGI3Q8N145 548 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ELSPBP1Q96BH3 223 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 CALHM2Q9HA72 323 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 LPAR2Q9HBW0 351 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 SSSCA1O60232 199 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 GUSBP08236 651 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
SMG8-202ENST00000543872 OR5I1Q13606 314 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 PRTGQ2VWP7 1150 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF506Q5JVG8 444 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 FAM57BQ71RH2 274 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF283Q8N7M2 679 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 CLDND2Q8NHS1 167 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 TBL1XR1Q9BZK7 514 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 NAA60Q9H7X0 242 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 ZNF319Q9P2F9 582 aa11.08□□□□□ -0.64
SMG8-202ENST00000543872 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 HLA-HP01893 362 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 RPS21P63220 83 aaKnown RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 IL13RA2Q14627 380 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 FAM189A2Q15884 450 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 LHX8Q68G74 356 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 TMEM171Q8WVE6 324 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 GCGP01275 180 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 C20orf196Q8IYI0 205 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 OR1N1Q8NGS0 311 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 MMABQ96EY8 250 aaPredicted RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 BOD1Q96IK1 185 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 NUDT16L1Q9BRJ7 211 aaKnown RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 PRR19A6NJB7 356 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 NXPH2O95156 264 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 CYB5R3P00387 301 aaPredicted RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 OPN1LWP04000 364 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 TK1P04183 234 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 FGF5P12034 268 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 IRF2P14316 349 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 CDAP32320 146 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 DYNLT3P51808 116 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 ELLP55199 621 aaPredicted RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 ERVFC1-1P60608 527 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
SMG8-202ENST00000543872 FBXW9Q5XUX1 488 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 SLC16A14Q7RTX9 510 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 OOSP2Q86WS3 158 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 DYRK2Q92630 601 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 PIGTQ969N2 578 aa11.07□□□□□ -0.64
SMG8-202ENST00000543872 ZNF665Q9H7R5 613 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms