RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SLC25A26Q70HW3 274 aa12□□□□□ -0.49
MSH2-206ENST00000543555 NUFIP2Q7Z417 695 aaKnown RBP12□□□□□ -0.49
MSH2-206ENST00000543555 SGPP2Q8IWX5 399 aa12□□□□□ -0.49
MSH2-206ENST00000543555 MCEMP1Q8IX19 187 aa12□□□□□ -0.49
MSH2-206ENST00000543555 POC1AQ8NBT0 407 aa12□□□□□ -0.49
MSH2-206ENST00000543555 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
MSH2-206ENST00000543555 DHRS9Q9BPW9 319 aa12□□□□□ -0.49
MSH2-206ENST00000543555 C1orf123Q9NWV4 160 aa12□□□□□ -0.49
MSH2-206ENST00000543555 A0A1B0GW55 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 SLC34A2O95436 690 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 HOXB5P09067 269 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L2P0CJ85 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L3P0CJ86 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L4P0CJ87 422 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L5P0CJ88 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L6P0CJ89 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4L7P0CJ90 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 MALLQ13021 153 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DHRS11Q6UWP2 260 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 EIF4E3Q8N5X7 224 aaKnown RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 BVESQ8NE79 360 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 PIK3IP1Q96FE7 263 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 OR5AC2Q9NZP5 309 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 DUX4Q9UBX2 424 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 FAM221AA4D161 298 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 CRYM-AS1A6NIL9 109 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 M6PRP20645 277 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 ARR3P36575 388 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 NPBWR2P48146 333 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 RAB1AP62820 205 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 PRDX4Q13162 271 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 IL15RAQ13261 267 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 SNTB1Q13884 538 aaKnown RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 PDCD1Q15116 288 aa11.99□□□□□ -0.49
MSH2-206ENST00000543555 MRPL21Q7Z2W9 205 aaKnown RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 MARS2Q96GW9 593 aaKnown RBP11.99□□□□□ -0.49
MSH2-206ENST00000543555 F8VVB4 439 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 F8VWA3 439 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 NUP62P37198 522 aaPredicted RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 UNQ6126/PRO20091Q6UXV3 157 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 Q8NFD4 153 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 BARX1Q9HBU1 254 aaPredicted RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 ARGFXA6NJG6 315 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 KRBOX1C9JBD0 128 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 RAB32Q13637 225 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 PAN3Q58A45 887 aaKnown RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 STOML3Q8TAV4 291 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 HPSE2Q8WWQ2 592 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 POM121Q96HA1 1249 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 FGF23Q9GZV9 251 aaPredicted RBP11.98□□□□□ -0.49
MSH2-206ENST00000543555 ZNF286AQ9HBT8 521 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 C12orf4Q9NQ89 552 aa11.98□□□□□ -0.49
MSH2-206ENST00000543555 FUT3P21217 361 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 PMELP40967 661 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
MSH2-206ENST00000543555 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 BATF2Q8N1L9 274 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 TOMM40LQ969M1 308 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 DEFB127Q9H1M4 99 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 ZNF442Q9H7R0 627 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 PRSS50Q9UI38 385 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 STARD10Q9Y365 291 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 MSGN1A6NI15 193 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 LGALS8O00214 317 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 OR7C1O76099 320 aaPredicted RBP11.97□□□□□ -0.49
MSH2-206ENST00000543555 CST4P01036 141 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 PET100P0DJ07 73 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 ZNF728P0DKX0 622 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 DNTTIP1Q9H147 329 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 LDAHQ9H6V9 325 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 GSKIPQ9P0R6 139 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 MEMO1Q9Y316 297 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 ZNF205O95201 554 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 NGFP01138 241 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 PIGPP57054 158 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 PLP2Q04941 152 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 TMEM211Q6ICI0 200 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 Q6ZPA2 131 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 AQP10Q96PS8 301 aa11.97□□□□□ -0.49
MSH2-206ENST00000543555 B8ZZF3 427 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 TPT1P13693 172 aaKnown RBP11.96□□□□□ -0.49
MSH2-206ENST00000543555 BCL3P20749 454 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 HAAOP46952 286 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 GPM6AP51674 278 aa11.96□□□□□ -0.49
MSH2-206ENST00000543555 ARG2P78540 354 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms