RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	STUM	Q69YW2	141 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	ELP2	Q6IA86	826 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	FAM166A	Q6J272	317 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	METAP1D	Q6UB28	335 aa	Predicted RBP	8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	LYPD2	Q6UXB3	125 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	ASCC1	Q8N9N2	400 aa	Known RBP	8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	MAPK1IP1L	Q8NDC0	245 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	TMEM104	Q8NE00	496 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR8B3	Q8NGG8	313 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR51T1	Q8NGJ9	327 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	ANGPTL6	Q8NI99	470 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	SLC25A28	Q96A46	364 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	SLC25A46	Q96AG3	418 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	RAB39B	Q96DA2	213 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	MED30	Q96HR3	178 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR8B2	Q96RD0	313 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	TMEM59	Q9BXS4	323 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	KCNK15	Q9H427	330 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	ZNF665	Q9H7R5	613 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	LIN7B	Q9HAP6	207 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545	IL36RN	Q9UBH0	155 aa		8.49	□□□□□ -1.05
CPSF7-221	ENST00000543545		H3BMQ9	156 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545		H7C1Q1	480 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	SIRPB1	O00241	398 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	NDUFB3	O43676	98 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR7C1	O76099	320 aa	Predicted RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	PAH	P00439	452 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	SOX6	P35712	828 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	IL13RA1	P78552	427 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	COL10A1	Q03692	680 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	TAF9	Q16594	264 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	ESCO2	Q56NI9	601 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	ATAD3C	Q5T2N8	411 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	ATPAF1	Q5TC12	328 aa	Predicted RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR2W3	Q7Z3T1	314 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	CD177	Q8N6Q3	437 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	FAM216B	Q8N7L0	139 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	TMEM185A	Q8NFB2	350 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	PPP1R35	Q8TAP8	253 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	DGCR14	Q96DF8	476 aa	Known RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	MRPS24	Q96EL2	167 aa	Known RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	NEIL1	Q96FI4	390 aa	Predicted RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	URM1	Q9BTM9	101 aa	Known RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	PATZ1	Q9HBE1	687 aa	Known RBP	8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	RAB22A	Q9UL26	194 aa		8.48	□□□□□ -1.05
CPSF7-221	ENST00000543545	ITPR2	Q14571	2701 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	TMEM272	A0A1B0GTI8	110 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	TMEM14DP	A8MWL7	114 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	HSPB6	O14558	160 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	DVL1	O14640	695 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	GEMIN2	O14893	280 aa	Known RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	SIGLEC5	O15389	551 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR2H2	O95918	312 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	IGHV2-5	P01817	119 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	WNT2	P09544	360 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	NDUFB7	P17568	137 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	AMY2B	P19961	511 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	PITPNB	P48739	271 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	RBM11	P57052	281 aa	Known RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	LMO4	P61968	165 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	GNB2	P62879	340 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	RPS27A	P62979	156 aa	Known RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	LOXL1	Q08397	574 aa	Predicted RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	IL13RA2	Q14627	380 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ZNF146	Q15072	292 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	LRRC10	Q5BKY1	277 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	NKAPL	Q5M9Q1	402 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ZNF788	Q6ZQV5	615 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ZNF561	Q8N587	486 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ZNRF1	Q8ND25	227 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545		Q8NFD4	153 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	LGALS14	Q8TCE9	139 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	NEK7	Q8TDX7	302 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ST8SIA4	Q92187	359 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	AP3S1	Q92572	193 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	PHF21A	Q96BD5	680 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	SDSL	Q96GA7	329 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	C1orf147	Q96MC9	270 aa	Predicted RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	GAFA1	Q96PS6	74 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	NEDD4L	Q96PU5	975 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	MRI1	Q9BV20	369 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	DNTTIP1	Q9H147	329 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	LPAR2	Q9HBW0	351 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ING3	Q9NXR8	418 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	ABRACL	Q9P1F3	81 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	SLC25A10	Q9UBX3	287 aa	Predicted RBP	8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	CLN8	Q9UBY8	286 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	OR5V1	Q9UGF6	321 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	METRN	Q9UJH8	293 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545	MAB21L2	Q9Y586	359 aa		8.47	□□□□□ -1.05
CPSF7-221	ENST00000543545		A0A1B0GW55	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	METTL21EP	A6NDL7	271 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545		H3BUI4	141 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF701	M0R085	212 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	TNFRSF13B	O14836	293 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	PHF1	O43189	567 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM127	O75204	238 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L2	P0CJ85	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L3	P0CJ86	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L4	P0CJ87	422 aa		8.46	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms