RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ASB10Q8WXI3 467 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF385DQ9H6B1 395 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 NPDC1Q9NQX5 325 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 AMMECR1Q9Y4X0 333 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 NBASA2RRP1 2371 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ADRA2CP18825 462 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ACP1P24666 158 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 RPS27AP62979 156 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CDK5Q00535 292 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SPANXN5Q5MJ07 72 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM268Q5VZI3 342 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ASCL4Q6XD76 172 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR10V1Q8NGI7 309 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CNTNAP3Q9BZ76 1288 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 PILRAQ9UKJ1 303 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 NPTNQ9Y639 398 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CACNA1IQ9P0X4 2223 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF354AO60765 605 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5G3P0C626 314 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 ZBTB25P24278 435 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 F2RP25116 425 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CD40P25942 277 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CHATP28329 748 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 P2RY6Q15077 328 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 PLA1AQ53H76 456 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 FHL5Q5TD97 284 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 UBALD1Q8TB05 177 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 GPX8Q8TED1 209 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 HARBI1Q96MB7 349 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CIB3Q96Q77 187 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 GPR35Q9HC97 309 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 MEX3AA1L020 520 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 C1QAP02745 245 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CST2P09228 141 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 HOXB1P14653 301 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 BRS3P32247 399 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 PNLIPRP3Q17RR3 467 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CDONQ4KMG0 1287 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 OR13C8Q8NGS7 320 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 FLRT3Q9NZU0 649 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 ZFP92A6NM28 416 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 HPNP05981 417 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 PRF1P14222 555 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CD1EP15812 388 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 HRH1P35367 487 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 NUDT10Q8NFP7 164 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 OR10P1Q8NGE3 313 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5B3Q8NH48 314 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 RTN4IP1Q8WWV3 396 aaPredicted RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 CHST6Q9GZX3 395 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 RALYQ9UKM9 306 aaKnown RBP6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 DTX4Q9Y2E6 619 aa6.09□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A1W2PPQ1 181 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 CDC42EP2O14613 210 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 CLN5O75503 358 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 MPZL1O95297 269 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 FUCA1P04066 466 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 PI3P19957 117 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 HMGA2P52926 109 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 RAB5BP61020 215 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 DGCR2P98153 550 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 C17orf107Q6ZR85 190 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM123Q8N131 208 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 OR10AD1Q8NGE0 317 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 DERL3Q96Q80 235 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 LRFN3Q9BTN0 628 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF167Q9H6Y7 350 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 PARP14Q460N5 1801 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 MYOFQ9NZM1 2061 aa6.09□□□□□ -1.44
SRGAP1-206ENST00000543397 LOC390937A0A1W2PQ73 354 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 GDF9O60383 454 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4E1P0C645 316 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CSRP1P21291 193 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PTGFRP43088 359 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM27D1Q5T7N8 215 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ATP1A1-AS1Q5TC04 95 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 EIF4E3Q8N5X7 224 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ST8SIA2Q92186 375 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 MOB3AQ96BX8 217 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TINAGQ9UJW2 476 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TRAV1-2A0A0B4J238 106 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 IGKV1-8A0A0C4DH67 115 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 NPIPB8E9PQR5 432 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 FABP7O15540 132 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 AQP8O94778 261 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ZFPL1O95159 310 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 HRASP01112 189 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR10J4P0C629 311 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 EPXP11678 715 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 WNT5AP41221 380 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 KCNJ3P48549 501 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms