RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRAPPC6AO75865 159 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 BRI3O95415 125 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 C6orf47O95873 294 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CCNE2O96020 404 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 IGHV3-23P01764 117 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 TNNC2P02585 160 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 S100A8P05109 93 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 BPGMP07738 259 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 RBP1P09455 135 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 GNAO1P09471 354 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 PSKH1P11801 424 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 GABRG2P18507 467 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 PGAM1P18669 254 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 USF1P22415 310 aaPredicted RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 COX7A1P24310 79 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 F2RP25116 425 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 PSMB6P28072 239 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CD40LGP29965 261 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ERP29P30040 261 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 HRH1P35367 487 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 TAS2R39P59534 338 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 RPL31P62899 125 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 C2orf80Q0P641 193 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 INCA1Q0VD86 236 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 FADDQ13158 208 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 STX5Q13190 355 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 SLAMF1Q13291 335 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 FZD2Q14332 565 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 GPNMBQ14956 572 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 MAD2L1BPQ15013 274 aaPredicted RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 GSG1Q2KHT4 349 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF181Q2M3W8 571 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 Q5BKY6 102 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CDKL4Q5MAI5 379 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ATAD3CQ5T2N8 411 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CPTPQ5TA50 214 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 PTRHD1Q6GMV3 140 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 DCUN1D2Q6PH85 259 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 NPSR1Q6W5P4 371 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 RTL4Q6ZR62 310 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 SSX6Q7RTT6 188 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 OAFQ86UD1 273 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CTAGE3PQ8IX95 158 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 FAM71AQ8IYT1 594 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 OR51A7Q8NH64 312 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ZFP90Q8TF47 636 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 GEMIN6Q8WXD5 167 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 TNFRSF14Q92956 283 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 FAM3DQ96BQ1 224 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 RCN3Q96D15 328 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 MRPL48Q96GC5 212 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF75AQ96N20 296 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 MBOAT7Q96N66 472 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 RILPQ96NA2 401 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 QKIQ96PU8 341 aaKnown RBP eCLIP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 SOSTQ9BQB4 213 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 TIMM29Q9BSF4 260 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 COPS4Q9BT78 406 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 YTHDF1Q9BYJ9 559 aaKnown RBP2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 OR51V1Q9H2C8 321 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 SLC25A22Q9H936 323 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 DMAC2Q9NW81 257 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 MARCH5Q9NX47 278 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 NDUFAF1Q9Y375 327 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 URGCP-MRPS24S4R325 110 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 HSPE1-MOB4S4R3N1 261 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 PLIN4Q96Q06 1357 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 DCHS1Q96JQ0 3298 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 CEP250Q9BV73 2442 aa2.94□□□□□ -1.94
SFSWAP-211ENST00000542813 FOCADQ5VW36 1801 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 EP300Q09472 2414 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 GCN1Q92616 2671 aaKnown RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SPTBN2O15020 2390 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 NAV1Q8NEY1 1877 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ANKRD20A5PA0PJZ0 165 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 F8VP50 259 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 MKRN2OSH3BPM6 223 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 COPEO14579 308 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 GPR171O14626 319 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SLC16A7O60669 478 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SERF1AO75920 110 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PROSCO94903 275 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 FBP1P09467 338 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 IL7P13232 177 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 CYBAP13498 195 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 IGFBP3P17936 291 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RPL22P35268 128 aaKnown RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 MAS1LP35410 378 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ARL2P36404 184 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ACTR1BP42025 376 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 HCCSP53701 268 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 UBE2G2P60604 165 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RPS21P63220 83 aaKnown RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF45Q02386 682 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 FLOT2Q14254 428 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PIGHQ14442 188 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PDK2Q15119 407 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms