RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IAH1Q2TAA2 248 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-208ENST00000542557 PIGYQ3MUY2 71 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 OXLD1Q5BKU9 147 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 TMEM211Q6ICI0 200 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 SPINK14Q6IE38 97 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 EIF5AL1Q6IS14 154 aaKnown RBP5.66□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF585AQ6P3V2 769 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 Q6ZS49 121 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 SAXO1Q8IYX7 474 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 BHLHE23Q8NDY6 225 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
PTPRO-208ENST00000542557 BPIFCQ8NFQ6 507 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 ADAMTS17Q8TE56 1095 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 ARL11Q969Q4 196 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 SUCNR1Q9BXA5 334 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 LIME1Q9H400 295 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 NAA60Q9H7X0 242 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 IFT22Q9H7X7 185 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 C12orf4Q9NQ89 552 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 ASF1BQ9NVP2 202 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 ST3GAL6Q9Y274 331 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 KCNIP3Q9Y2W7 256 aa5.66□□□□□ -1.5
PTPRO-208ENST00000542557 TECTAO75443 2155 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 VPS13AQ96RL7 3174 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF850A8MQ14 1090 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF587BE7ETH6 402 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 SS18L1O75177 396 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 DEDDO75618 318 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 APOC3P02656 99 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 GAPDHP04406 335 aaKnown RBP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 HKR1P10072 659 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 PIGPP57054 158 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 S100A10P60903 97 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 LPAL2Q16609 132 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 SRSF7Q16629 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 IL34Q6ZMJ4 242 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 DEFB123Q8N688 67 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 MOB3AQ96BX8 217 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 SAT2Q96F10 170 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 SIGLEC12Q96PQ1 595 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-208ENST00000542557 ARRDC1-AS1Q9H2J1 176 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 OPA3Q9H6K4 179 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 SLC7A10Q9NS82 523 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 FOXJ2Q9P0K8 574 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF581Q9P0T4 197 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 DOCK10Q96BY6 2186 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 FRYLO94915 3013 aa5.65□□□□□ -1.5
PTPRO-208ENST00000542557 PQLC2LA1A4F0 135 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 LNP1A1A4G5 178 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 PGPEP1LA6NFU8 196 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 SYNGR4O95473 234 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 FAM157CP0CG43 387 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 FUT3P21217 361 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 OPRM1P35372 400 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 GLP1RP43220 463 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 ARF1P84077 181 aaKnown RBP5.65□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM187Q14656 261 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 SMCO1Q147U7 214 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 DAZAP2Q15038 168 aaPredicted RBP5.65□□□□□ -1.51
PTPRO-208ENST00000542557 OR1C1Q15619 314 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 CCDC157Q569K6 752 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 DCAF10Q5QP82 559 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 PXDC1Q5TGL8 231 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 GGNBP1Q5YKI7 109 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 SLC22A25Q6T423 547 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM200AQ86VY9 491 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF611Q8N823 705 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 TMED6Q8WW62 240 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 PIGCQ92535 297 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 IP6K3Q96PC2 410 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 TTTY12Q9BZ98 90 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 ACKR4Q9NPB9 350 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 MMP26Q9NRE1 261 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 ZFP57Q9NU63 452 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 LPAR3Q9UBY5 353 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 STARD10Q9Y365 291 aa5.65□□□□□ -1.51
PTPRO-208ENST00000542557 TNRC6AQ8NDV7 1962 aaKnown RBP5.65□□□□□ -1.51
PTPRO-208ENST00000542557 A0A1W2PNU3 283 aaPredicted RBP5.64□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM218A2RU14 115 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 F10P00742 488 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 CST4P01036 141 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 RRADP55042 308 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 ABCA11PQ4W5N1 156 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 PLA2G2CQ5R387 149 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 WDR73Q6P4I2 378 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 CALHM1Q8IU99 346 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 CCDC71LQ8N9Z2 235 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 OR56B2PQ8NGI1 322 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 RTN4IP1Q8WWV3 396 aaPredicted RBP5.64□□□□□ -1.51
PTPRO-208ENST00000542557 MRPL24Q96A35 216 aaKnown RBP5.64□□□□□ -1.51
PTPRO-208ENST00000542557 LRRC46Q96FV0 321 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 MARS2Q96GW9 593 aaKnown RBP5.64□□□□□ -1.51
PTPRO-208ENST00000542557 SMIM8Q96KF7 97 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 PRRX2Q99811 253 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 PLEKHA2Q9HB19 425 aa5.64□□□□□ -1.51
PTPRO-208ENST00000542557 SLC2A9Q9NRM0 540 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms