RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 AMY2BP19961 511 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 SERPINB10P48595 397 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 CAPZA1P52907 286 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 CAV3P56539 151 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 P2RY14Q15391 338 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 NHLRC3Q5JS37 347 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 SFXN4Q6P4A7 337 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 ZNF788Q6ZQV5 615 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 CROCCP3Q8IVE0 287 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 KCNG3Q8TAE7 436 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 FAM3DQ96BQ1 224 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 NEIL1Q96FI4 390 aaPredicted RBP14.28□□□□□ -0.12
LIG1-204ENST00000542460 SDSLQ96GA7 329 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 MED30Q96HR3 178 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 F5H0A9 414 aaPredicted RBP14.27□□□□□ -0.12
LIG1-204ENST00000542460 SH2D1BO14796 132 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 CRTAPO75718 401 aaPredicted RBP14.27□□□□□ -0.12
LIG1-204ENST00000542460 VSIG8P0DPA2 414 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 DUSP1P28562 367 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 IL2RGP31785 369 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 SNU13P55769 128 aaKnown RBP14.27□□□□□ -0.12
LIG1-204ENST00000542460 CLDN12P56749 244 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 IL13RA1P78552 427 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 USP43Q70EL4 1123 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.12
LIG1-204ENST00000542460 CD177Q8N6Q3 437 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 MAPK1IP1LQ8NDC0 245 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 TMEM104Q8NE00 496 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 OR51D1Q8NGF3 324 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 OR8B3Q8NGG8 313 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 GAFA1Q96PS6 74 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 OR8B2Q96RD0 313 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 DAPK2Q9UIK4 370 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 ST3GAL6Q9Y274 331 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 CEPT1Q9Y6K0 416 aa14.27□□□□□ -0.12
LIG1-204ENST00000542460 A0A1W2PP11 408 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 SIGLEC5O15389 551 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 TMEM127O75204 238 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 HAND1O96004 215 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 TFF1P04155 84 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 CHRM2P08172 466 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 SLC2A2P11168 524 aaPredicted RBP14.26□□□□□ -0.13
LIG1-204ENST00000542460 MGMTP16455 207 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
LIG1-204ENST00000542460 RBM11P57052 281 aaKnown RBP14.26□□□□□ -0.13
LIG1-204ENST00000542460 IL13RA2Q14627 380 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 C2orf76Q3KRA6 126 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 OR2W3Q7Z3T1 314 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 ZNF561Q8N587 486 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 LIN7BQ9HAP6 207 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 CTSZQ9UBR2 303 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 MAB21L2Q9Y586 359 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 ITPR3Q14573 2671 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 MED13LQ71F56 2210 aa14.26□□□□□ -0.13
LIG1-204ENST00000542460 TMEM14DPA8MWL7 114 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 PITPNBP48739 271 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 NPY4RP50391 375 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 QRFPP83859 136 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 PIGYQ3MUY2 71 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 ESCO2Q56NI9 601 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 ZNF841Q6ZN19 808 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 LINC00596Q86U02 117 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 FAM216BQ8N7L0 139 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 FAM46BQ96A09 425 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 SLC25A46Q96AG3 418 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 ISOC1Q96CN7 298 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 COX4I2Q96KJ9 171 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 SELENOIQ9C0D9 397 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 DCSTAMPQ9H295 470 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 BANF2Q9H503 90 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 FBLN5Q9UBX5 448 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 CLN8Q9UBY8 286 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 ZNF469Q96JG9 3925 aaPredicted RBP14.25□□□□□ -0.13
LIG1-204ENST00000542460 CCDC160A6NGH7 325 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 SMAD7O15105 426 aaKnown RBP14.25□□□□□ -0.13
LIG1-204ENST00000542460 DEGS1O15121 323 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 NDUFB3O43676 98 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 MPIG6BO95866 241 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 COL10A1Q03692 680 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 IKZF1Q13422 519 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 UNC119Q13432 240 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 TMEM249Q2WGJ8 235 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 LRRC10Q5BKY1 277 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 IDNKQ5T6J7 187 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 OR10K2Q6IF99 312 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 CHST4Q8NCG5 386 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 ZNRF1Q8ND25 227 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 NDNFQ8TB73 568 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 C1orf159Q96HA4 380 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 MRI1Q9BV20 369 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 KCNK15Q9H427 330 aa14.25□□□□□ -0.13
LIG1-204ENST00000542460 A0A1B0GW55 424 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 DVL1O14640 695 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 GEMIN2O14893 280 aaKnown RBP14.24□□□□□ -0.13
LIG1-204ENST00000542460 LDLRAD4O15165 306 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 OR2H2O95918 312 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 DUX4L2P0CJ85 424 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 DUX4L3P0CJ86 424 aa14.24□□□□□ -0.13
LIG1-204ENST00000542460 DUX4L4P0CJ87 422 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms