RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ADGRB1O14514 1584 aa2.54□□□□□ -2
USP28-210ENST00000542033 CPS1P31327 1500 aa2.54□□□□□ -2
USP28-210ENST00000542033 DISP2A7MBM2 1401 aa2.54□□□□□ -2
USP28-210ENST00000542033 PRG4Q92954 1404 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 A0A087X0T9 212 aa2.54□□□□□ -2
USP28-210ENST00000542033 C7orf66A4D0T2 115 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR5H14A6NHG9 310 aa2.54□□□□□ -2
USP28-210ENST00000542033 ANKRD63C9JTQ0 380 aa2.54□□□□□ -2
USP28-210ENST00000542033 C9JVG2 144 aa2.54□□□□□ -2
USP28-210ENST00000542033 UPK1AO00322 258 aa2.54□□□□□ -2
USP28-210ENST00000542033 SLC17A3O00476 420 aa2.54□□□□□ -2
USP28-210ENST00000542033 UBFD1O14562 309 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 FABP7O15540 132 aa2.54□□□□□ -2
USP28-210ENST00000542033 SSNA1O43805 119 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR2T1O43869 369 aa2.54□□□□□ -2
USP28-210ENST00000542033 ICOSLGO75144 302 aa2.54□□□□□ -2
USP28-210ENST00000542033 SH3BGRLO75368 114 aa2.54□□□□□ -2
USP28-210ENST00000542033 LRATO95237 230 aa2.54□□□□□ -2
USP28-210ENST00000542033 BRI3O95415 125 aa2.54□□□□□ -2
USP28-210ENST00000542033 MPC2O95563 127 aa2.54□□□□□ -2
USP28-210ENST00000542033 MT-CO2P00403 227 aa2.54□□□□□ -2
USP28-210ENST00000542033 APODP05090 189 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR5AC1P0C628 307 aa2.54□□□□□ -2
USP28-210ENST00000542033 GKN3PP0CG01 181 aa2.54□□□□□ -2
USP28-210ENST00000542033 ABOP16442 354 aa2.54□□□□□ -2
USP28-210ENST00000542033 UGT2B7P16662 529 aa2.54□□□□□ -2
USP28-210ENST00000542033 GPX2P18283 190 aa2.54□□□□□ -2
USP28-210ENST00000542033 GZMHP20718 246 aa2.54□□□□□ -2
USP28-210ENST00000542033 ZBTB25P24278 435 aa2.54□□□□□ -2
USP28-210ENST00000542033 F2RP25116 425 aa2.54□□□□□ -2
USP28-210ENST00000542033 S100GP29377 79 aa2.54□□□□□ -2
USP28-210ENST00000542033 BRS3P32247 399 aa2.54□□□□□ -2
USP28-210ENST00000542033 GLP1RP43220 463 aa2.54□□□□□ -2
USP28-210ENST00000542033 CSNK1A1P48729 337 aa2.54□□□□□ -2
USP28-210ENST00000542033 RAB7AP51149 207 aa2.54□□□□□ -2
USP28-210ENST00000542033 MFAP2P55001 183 aa2.54□□□□□ -2
USP28-210ENST00000542033 ARPP19P56211 112 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR10A3P58181 314 aa2.54□□□□□ -2
USP28-210ENST00000542033 MLF1P58340 268 aa2.54□□□□□ -2
USP28-210ENST00000542033 RAB8AP61006 207 aa2.54□□□□□ -2
USP28-210ENST00000542033 TBPL1P62380 186 aa2.54□□□□□ -2
USP28-210ENST00000542033 RANP62826 216 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 PRPSAP1Q14558 356 aa2.54□□□□□ -2
USP28-210ENST00000542033 SURF2Q15527 256 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 TSNQ15631 228 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 ZIC1Q15915 447 aa2.54□□□□□ -2
USP28-210ENST00000542033 KCTD19Q17RG1 926 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 PLPPR5Q32ZL2 321 aa2.54□□□□□ -2
USP28-210ENST00000542033 LGALSLQ3ZCW2 172 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 OCIAD2Q56VL3 154 aa2.54□□□□□ -2
USP28-210ENST00000542033 GCSAMLQ5JQS6 135 aa2.54□□□□□ -2
USP28-210ENST00000542033 SLC25A30Q5SVS4 291 aa2.54□□□□□ -2
USP28-210ENST00000542033 C9orf66Q5T8R8 295 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR2A2Q6IF42 318 aa2.54□□□□□ -2
USP28-210ENST00000542033 H3F3CQ6NXT2 135 aa2.54□□□□□ -2
USP28-210ENST00000542033 TMEM220Q6QAJ8 160 aa2.54□□□□□ -2
USP28-210ENST00000542033 WDR74Q6RFH5 385 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 TMEM205Q6UW68 189 aa2.54□□□□□ -2
USP28-210ENST00000542033 FAM131AQ6UXB0 335 aa2.54□□□□□ -2
USP28-210ENST00000542033 UNQ9370/PRO34162Q6UXP9 181 aa2.54□□□□□ -2
USP28-210ENST00000542033 ZNF720Q7Z2F6 126 aa2.54□□□□□ -2
USP28-210ENST00000542033 SLC36A1Q7Z2H8 476 aa2.54□□□□□ -2
USP28-210ENST00000542033 IFNEQ86WN2 208 aa2.54□□□□□ -2
USP28-210ENST00000542033 SNX29P2Q8IUI4 249 aa2.54□□□□□ -2
USP28-210ENST00000542033 TRAPPC5Q8IUR0 188 aa2.54□□□□□ -2
USP28-210ENST00000542033 FUNDC1Q8IVP5 155 aa2.54□□□□□ -2
USP28-210ENST00000542033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 OR10K1Q8NGX5 313 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR1F12Q8NHA8 337 aa2.54□□□□□ -2
USP28-210ENST00000542033 KCNG3Q8TAE7 436 aa2.54□□□□□ -2
USP28-210ENST00000542033 RHEBL1Q8TAI7 183 aa2.54□□□□□ -2
USP28-210ENST00000542033 MRAPQ8TCY5 172 aa2.54□□□□□ -2
USP28-210ENST00000542033 SDR42E1Q8WUS8 393 aa2.54□□□□□ -2
USP28-210ENST00000542033 SKA2Q8WVK7 121 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 ISOC2Q96AB3 205 aa2.54□□□□□ -2
USP28-210ENST00000542033 DNAJA3Q96EY1 480 aa2.54□□□□□ -2
USP28-210ENST00000542033 PELI1Q96FA3 418 aa2.54□□□□□ -2
USP28-210ENST00000542033 PHYHIPLQ96FC7 376 aa2.54□□□□□ -2
USP28-210ENST00000542033 AURKBQ96GD4 344 aaPredicted RBP2.54□□□□□ -2
USP28-210ENST00000542033 TECTBQ96PL2 329 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR7D2Q96RA2 312 aa2.54□□□□□ -2
USP28-210ENST00000542033 OR52E6Q96RD3 313 aa2.54□□□□□ -2
USP28-210ENST00000542033 IL4I1Q96RQ9 567 aa2.54□□□□□ -2
USP28-210ENST00000542033 SLC6A7Q99884 636 aa2.54□□□□□ -2
USP28-210ENST00000542033 PBDC1Q9BVG4 233 aa2.54□□□□□ -2
USP28-210ENST00000542033 TLNRD1Q9H1K6 362 aa2.54□□□□□ -2
USP28-210ENST00000542033 ABCG5Q9H222 651 aa2.54□□□□□ -2
USP28-210ENST00000542033 ADGRL4Q9HBW9 690 aa2.54□□□□□ -2
USP28-210ENST00000542033 RAB18Q9NP72 206 aa2.54□□□□□ -2
USP28-210ENST00000542033 RBFOX1Q9NWB1 397 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 MRM2Q9UI43 246 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 ZNF391Q9UJN7 358 aa2.54□□□□□ -2
USP28-210ENST00000542033 SAMD4AQ9UPU9 718 aaKnown RBP2.54□□□□□ -2
USP28-210ENST00000542033 OTOFQ9HC10 1997 aa2.54□□□□□ -2
USP28-210ENST00000542033 CHD4Q14839 1912 aa2.54□□□□□ -2
USP28-210ENST00000542033 LAMB1P07942 1786 aa2.54□□□□□ -2
USP28-210ENST00000542033 PHRF1Q9P1Y6 1649 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 NUP153P49790 1475 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 FER1L5A0AVI2 2057 aa2.53□□□□□ -2
USP28-210ENST00000542033 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms