RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C19orf24Q9BVV8 132 aa7.99□□□□□ -1.13
YBX3-212ENST00000542002 HMG20AQ9NP66 347 aa7.99□□□□□ -1.13
YBX3-212ENST00000542002 SIRT7Q9NRC8 400 aa7.99□□□□□ -1.13
YBX3-212ENST00000542002 ONECUT1Q9UBC0 465 aa7.99□□□□□ -1.13
YBX3-212ENST00000542002 KPTNQ9Y664 436 aa7.99□□□□□ -1.13
YBX3-212ENST00000542002 WNK2Q9Y3S1 2297 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 TRBV5-7A0A0A0MS05 114 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 RNASEK-C17orf49H0YIS7 233 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 HCKP08631 526 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 OCM2P0CE71 109 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 CELP19835 753 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 RAB3AP20336 220 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 CRHBPP24387 322 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 CAPZA1P52907 286 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 SNU13P55769 128 aaKnown RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 ZNF146Q15072 292 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 METTL11BQ5VVY1 283 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 C1orf122Q6ZSJ8 110 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 SATL1Q86VE3 508 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 PNKDQ8N490 385 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 ZNF418Q8TF45 676 aaPredicted RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 TAF15Q92804 592 aaKnown RBP eCLIP7.98□□□□□ -1.13
YBX3-212ENST00000542002 EMG1Q92979 244 aaKnown RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 ZDHHC16Q969W1 377 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 OR14A2Q96R54 314 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 MS4A7Q9GZW8 240 aaPredicted RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 PPIL3Q9H2H8 161 aaKnown RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 SEBOXQ9HB31 216 aaPredicted RBP7.98□□□□□ -1.13
YBX3-212ENST00000542002 ZNF581Q9P0T4 197 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 ERGIC3Q9Y282 383 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 COL6A5A8TX70 2615 aa7.98□□□□□ -1.13
YBX3-212ENST00000542002 ANK2Q01484 3957 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 IGHV1-69DA0A0B4J2H0 117 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 A0A1W2PRD5 423 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 A0A1W2PRF3 423 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 A0A1W2PRM7 423 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 GABRPO00591 440 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 GPX5O75715 221 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 HAND1O96004 215 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 ALDOBP05062 364 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 CD1AP06126 327 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 CHRM2P08172 466 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 OCMP0CE72 109 aaPredicted RBP7.97□□□□□ -1.13
YBX3-212ENST00000542002 TMEM225BP0DP42 221 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 CCL3L1P16619 93 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 PRKACAP17612 351 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 TGFBR2P37173 567 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 MAP2K4P45985 399 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 OR3A4PP47883 348 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 DLX6P56179 175 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 RPL31P62899 125 aaKnown RBP7.97□□□□□ -1.13
YBX3-212ENST00000542002 ACSM1Q08AH1 577 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 KLRD1Q13241 179 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 MED21Q13503 144 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 ZNF273Q14593 569 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 Q499Y3 187 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 YIF1BQ5BJH7 314 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 Q6P435 159 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 UNQ9370/PRO34162Q6UXP9 181 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 ASCL4Q6XD76 172 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 TCF23Q7RTU1 214 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 LYPD6Q86Y78 171 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 SAXO1Q8IYX7 474 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 TPRX1Q8N7U7 411 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 ZSCAN4Q8NAM6 433 aaPredicted RBP7.97□□□□□ -1.13
YBX3-212ENST00000542002 OR4S1Q8NGB4 309 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 MYDGFQ969H8 173 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 CNBD2Q96M20 576 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 DMRTB1Q96MA1 342 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 SUCNR1Q9BXA5 334 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 VCX3BQ9H321 246 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 PRDM13Q9H4Q3 707 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 SCN3BQ9NY72 215 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 GSTK1Q9Y2Q3 226 aa7.97□□□□□ -1.13
YBX3-212ENST00000542002 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 A0A0G2JK05 382 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 A0A0U1RQK1 487 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 A0A1W2PQ09 198 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 M0R1W7 72 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 SIRPB1O00241 398 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 MYL12BO14950 172 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 CDRT1O95170 752 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 OR2H2O95918 312 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 PRTN3P24158 256 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 LMO1P25800 156 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 VHLP40337 213 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 PTGFRP43088 359 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 OR3A1P47881 315 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 UBA52P62987 128 aaKnown RBP7.96□□□□□ -1.14
YBX3-212ENST00000542002 SCN1BQ07699 218 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 BAMBIQ13145 260 aa7.96□□□□□ -1.14
YBX3-212ENST00000542002 SCGB2A2Q13296 93 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms