RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 IGHV3-64DA0A0J9YX35 117 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 CENPXA8MT69 81 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 GRPP07492 148 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 SSBP1Q04837 148 aaKnown RBP23.51■■□□□ 1.35
CCM2-218ENST00000541586 AGAP6Q5VW22 663 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 GTF3AQ92664 365 aaKnown RBP23.51■■□□□ 1.35
CCM2-218ENST00000541586 ZNF488Q96MN9 340 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 C7orf50Q9BRJ6 194 aaKnown RBP23.51■■□□□ 1.35
CCM2-218ENST00000541586 TAAR3PQ9P1P4 343 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 CACNA1DQ01668 2161 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 TACC2O95359 2948 aa23.51■■□□□ 1.35
CCM2-218ENST00000541586 DANCRP0C864 163 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 BTCP35070 178 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 FGF12P61328 243 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 MAB21L1Q13394 359 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 TRAPPC6BQ86SZ2 158 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.5■■□□□ 1.351e-6■■■■□ 24.6
CCM2-218ENST00000541586 TAS2R8Q9NYW2 309 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 FAM240BA0A1B0GVZ2 78 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 MT-ND4P03905 459 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 FCER2P06734 321 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 CSF1P09603 554 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 GNG2P59768 71 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 ACTBP60709 375 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 ACTG1P63261 375 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 PNLIPRP3Q17RR3 467 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 MST1LQ2TV78 715 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 C6orf201Q7Z4U5 140 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 HRASLSQ9HDD0 168 aa23.5■■□□□ 1.35
CCM2-218ENST00000541586 ZSCAN5BA6NJL1 495 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 B9A039 149 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 CDIPTO14735 213 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 SSX5O60225 188 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 SLC6A1P30531 599 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 NKAPLQ5M9Q1 402 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 GLCCI1Q86VQ1 547 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 OR2Z1Q8NG97 314 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 ST8SIA4Q92187 359 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 CBLN4Q9NTU7 201 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 PLEKHJ1Q9NW61 149 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 POLDIP2Q9Y2S7 368 aa23.49■■□□□ 1.35
CCM2-218ENST00000541586 PLSCR5A0PG75 271 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 CD8AP01732 235 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 NKPD1Q17RQ9 610 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 NHLRC3Q5JS37 347 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 C20orf204Q6ZNR8 217 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 DUSP18Q8NEJ0 188 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 POM121Q96HA1 1249 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 MMP28Q9H239 520 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 NLKQ9UBE8 527 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 CSMD2Q7Z408 3487 aa23.48■■□□□ 1.35
CCM2-218ENST00000541586 CHATP28329 748 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 ARL6IP1Q15041 203 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 PDCD1Q15116 288 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 IL36RNQ9UBH0 155 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 HSF4Q9ULV5 492 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 DSCAMO60469 2012 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 SPG11Q96JI7 2443 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 SERPINE3A8MV23 424 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 PRKACAP17612 351 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 SNU13P55769 128 aaKnown RBP23.47■■□□□ 1.35
CCM2-218ENST00000541586 EFNB3Q15768 340 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 SWI5Q1ZZU3 235 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 C11orf53Q8IXP5 236 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 CELF2-AS1Q8N7Q2 184 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 CCL19Q99731 98 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 TLNRD1Q9H1K6 362 aa23.47■■□□□ 1.35
CCM2-218ENST00000541586 SNRPD2P62316 118 aaKnown RBP23.46■■□□□ 1.35
CCM2-218ENST00000541586 MZT1Q08AG7 82 aa23.46■■□□□ 1.35
CCM2-218ENST00000541586 PRAMEF6Q5VXH4 476 aa23.46■■□□□ 1.35
CCM2-218ENST00000541586 ZCCHC24Q8N2G6 241 aaKnown RBP23.46■■□□□ 1.35
CCM2-218ENST00000541586 GVQW1Q8N7I0 195 aa23.46■■□□□ 1.35
CCM2-218ENST00000541586 TRAF4Q9BUZ4 470 aaPredicted RBP23.46■■□□□ 1.35
CCM2-218ENST00000541586 RHOFQ9HBH0 211 aa23.46■■□□□ 1.35
CCM2-218ENST00000541586 FAM90A10PA6NDY2 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A18PA6NE21 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A16PA6NEW6 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A20PA6NIJ5 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A8PA6NJQ4 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A7PA6NKC0 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A22PA8MWA6 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A12PA8MX19 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A5PA8MXJ8 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A23PA8MXZ1 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 C3orf80F5H4A9 247 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 OR7C1O76099 320 aaPredicted RBP23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A15PP0C7V4 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A13PP0C7W8 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A14PP0C7W9 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM90A24PP0C7X0 464 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 RCVRNP35243 200 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 ERVK11-1P61568 191 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 ARFRP1Q13795 201 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 MPPED2Q15777 294 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 PLA1AQ53H76 456 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAAP20Q6NZ36 180 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 DTX2Q86UW9 622 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAM58AQ8N1B3 248 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 DEDD2Q8WXF8 326 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 EMG1Q92979 244 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms