RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PPP1R17O96001 155 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 AVPR2P30518 371 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 BSXQ3C1V8 233 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 CDX1P47902 265 aaPredicted RBP13.74□□□□□ -0.21
HMGA2-210ENST00000541363 LTB4R2Q9NPC1 389 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 PRSS50Q9UI38 385 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 ARRDC5A6NEK1 342 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 BSGP35613 385 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 PSG5Q15238 335 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 SNX22Q96L94 193 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 SLC26A1Q9H2B4 701 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 UBTD1Q9HAC8 227 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
HMGA2-210ENST00000541363 CACNG7P62955 275 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 TNFAIP6P98066 277 aaPredicted RBP13.74□□□□□ -0.21
HMGA2-210ENST00000541363 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
HMGA2-210ENST00000541363 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SSX8Q7RTT4 187 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 OR4P4Q8NGL7 312 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 GPA33Q99795 319 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SLX4Q8IY92 1834 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SFT2D2O95562 160 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 COL19A1Q14993 1142 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 MRM1Q6IN84 353 aaKnown RBP13.73□□□□□ -0.21
HMGA2-210ENST00000541363 FAM53AQ6NSI3 398 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-210ENST00000541363 MAP6Q96JE9 813 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 WDR13Q9H1Z4 485 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 CD81P60033 236 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-210ENST00000541363 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 HPXP02790 462 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 EMDP50402 254 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 HIST1H4GQ99525 98 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-210ENST00000541363 FAM157AC9JC47 383 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM131LA2VDJ0 1609 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 SLC17A2O00624 439 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 CCR2P41597 374 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 AESQ08117 197 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 AFMIDQ63HM1 303 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 PAQR6Q6TCH4 344 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 LRP12Q9Y561 859 aa13.73□□□□□ -0.21
HMGA2-210ENST00000541363 TRGV5A0A0B4J1U4 118 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 CDC14BO60729 498 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 DEFB103AP81534 67 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 C10orf113Q5VZT2 155 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM183AQ8IXX5 376 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 PGPEP1Q9NXJ5 209 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 LOXL2Q9Y4K0 774 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 GABRA1P14867 456 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 OR2C3Q8N628 320 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 ZNF383Q8NA42 475 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 FAM181BA6NEQ2 426 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 ISL1P61371 349 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 RER1O15258 196 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 GP1BAP07359 652 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 CEACAM16Q2WEN9 425 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 Q6ZSR9 355 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 C20orf196Q8IYI0 205 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 ABHD3Q8WU67 409 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 SS18L1O75177 396 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-210ENST00000541363 ZGLP1P0C6A0 271 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM108Q6UXF1 575 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 SMIM14Q96QK8 99 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM38BQ9NVV0 291 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 RABAC1Q9UI14 185 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 A0A1W2PR48 441 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 OR5AC1P0C628 307 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 IL24Q13007 206 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 ZNF385DQ9H6B1 395 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 HCFC2Q9Y5Z7 792 aa13.72□□□□□ -0.21
HMGA2-210ENST00000541363 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 MPDU1O75352 247 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 LGALS3P17931 250 aaKnown RBP13.71□□□□□ -0.21
HMGA2-210ENST00000541363 SUMO3P55854 103 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-210ENST00000541363 RNFT1Q5M7Z0 435 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-210ENST00000541363 DOK1Q99704 481 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 CDC42EP3Q9UKI2 254 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 SMIM6P0DI80 62 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 TMEM211Q6ICI0 200 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 FAM219AQ8IW50 185 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 OR8B3Q8NGG8 313 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 OR8D4Q8NGM9 314 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 OR8B2Q96RD0 313 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 FUT9Q9Y231 359 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms