RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SEH1LQ96EE3 360 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 MRI1Q9BV20 369 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 ELL3Q9HB65 397 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 LPAR2Q9HBW0 351 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 RBFOX1Q9NWB1 397 aaKnown RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 SSR3Q9UNL2 185 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 INSIG2Q9Y5U4 225 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 TRBV23-1A0A0A0MS06 115 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 IGHV2-70DA0A0C4DH43 119 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 IGKV1-12A0A0C4DH73 117 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 A0A1W2PPH5 198 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 IGKV1D-12P01611 117 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 GTF2F2P13984 249 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 CALRP27797 417 aaKnown RBP15.59■□□□□ 0.09
VPS33A-205ENST00000541169 NPBWR2P48146 333 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 HOXA4Q00056 320 aaPredicted RBP15.59■□□□□ 0.09
VPS33A-205ENST00000541169 FAHD2BQ6P2I3 314 aaPredicted RBP15.59■□□□□ 0.09
VPS33A-205ENST00000541169 GDPGP1Q6ZNW5 385 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 LRRTM1Q86UE6 522 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 CD177Q8N6Q3 437 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 FAM216BQ8N7L0 139 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 OR51T1Q8NGJ9 327 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 ST8SIA4Q92187 359 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 ORAI1Q96D31 301 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 FAHD2AQ96GK7 314 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 SHARPINQ9H0F6 387 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 OR14J1Q9UGF5 321 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 MRPS28Q9Y2Q9 187 aaKnown RBP15.59■□□□□ 0.09
VPS33A-205ENST00000541169 ZANQ9Y493 2812 aa15.59■□□□□ 0.09
VPS33A-205ENST00000541169 F8VVB4 439 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 F8VWA3 439 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 K7N7A8 449 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 HAND1O96004 215 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 SFTPBP07988 381 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 AMY2BP19961 511 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 LMO1P25800 156 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 OR3A4PP47883 348 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 PAX2Q02962 417 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 IKZF1Q13422 519 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 IL13RA2Q14627 380 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 INSL4Q14641 139 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 C1orf100Q5SVJ3 147 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 FAM27D1Q5T7N8 215 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 BTN2A1Q7KYR7 527 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 LYPD6Q86Y78 171 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 TMEM185AQ8NFB2 350 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 C8orf46Q8TAG6 207 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 SNX22Q96L94 193 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 NUDT16L1Q9BRJ7 211 aaKnown RBP15.58■□□□□ 0.08
VPS33A-205ENST00000541169 CST11Q9H112 138 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 CNTD2Q9H8S5 307 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 EXOSC4Q9NPD3 245 aaKnown RBP15.58■□□□□ 0.08
VPS33A-205ENST00000541169 ING4Q9UNL4 249 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 MAB21L2Q9Y586 359 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 ZNF469Q96JG9 3925 aaPredicted RBP15.58■□□□□ 0.08
VPS33A-205ENST00000541169 ABCA2Q9BZC7 2435 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 MALRD1Q5VYJ5 2156 aa15.58■□□□□ 0.08
VPS33A-205ENST00000541169 FUOMA2VDF0 154 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 TK1P04183 234 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 GP2P55259 537 aaKnown RBP15.57■□□□□ 0.08
VPS33A-205ENST00000541169 DGUOKQ16854 277 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 CR1LQ2VPA4 569 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 CHRFAM7AQ494W8 412 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 AWAT2Q6E213 333 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 TPRA1Q86W33 373 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 OR8H2Q8N162 312 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 OSR2Q8N2R0 312 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 ZNRF1Q8ND25 227 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 OR6M1Q8NGM8 313 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 DACT3Q96B18 629 aaPredicted RBP15.57■□□□□ 0.08
VPS33A-205ENST00000541169 DCTN5Q9BTE1 182 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 BEX2Q9BXY8 128 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 C7orf69Q9H7B7 122 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 IFT22Q9H7X7 185 aa15.57■□□□□ 0.08
VPS33A-205ENST00000541169 RPUSD1Q9UJJ7 312 aaKnown RBP15.57■□□□□ 0.08
VPS33A-205ENST00000541169 MAGEA13PA6NCF6 341 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A10PA6NDY2 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A18PA6NE21 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A16PA6NEW6 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A20PA6NIJ5 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A8PA6NJQ4 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A7PA6NKC0 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A22PA8MWA6 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A12PA8MX19 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A5PA8MXJ8 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A23PA8MXZ1 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 HTR3BO95264 441 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A15PP0C7V4 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A13PP0C7W8 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A14PP0C7W9 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM90A24PP0C7X0 464 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 CD36P16671 472 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 NDUFB7P17568 137 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 COL10A1Q03692 680 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 PAX8Q06710 450 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 MPV17LQ2QL34 196 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 FAM120AOSQ5T036 256 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 GLIPR1L1Q6UWM5 242 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 C1orf122Q6ZSJ8 110 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 C1QL2Q7Z5L3 287 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms