RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 BDH1Q02338 343 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 PRB3Q04118 309 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 PDCD1Q15116 288 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 SPHARQ15513 63 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 MED22Q15528 200 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 KRTAP24-1Q3LI83 254 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 Q499Y3 187 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 RNLSQ5VYX0 342 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 RUSC1-AS1Q66K80 236 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF529Q6P280 563 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 CRIP3Q6Q6R5 217 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 RBMS3Q6XE24 437 aaKnown RBP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 USP43Q70EL4 1123 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 VMO1Q7Z5L0 202 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 PDZD9Q8IXQ8 264 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 SAXO1Q8IYX7 474 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 FAM185AQ8N0U4 392 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 KIR3DL3Q8N743 410 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 SIGLECL1Q8N7X8 197 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 ZSCAN4Q8NAM6 433 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 OR52N4Q8NGI2 321 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 LHX4Q969G2 390 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 CPNE2Q96FN4 548 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 OR14A2Q96R54 314 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 OR5M11Q96RB7 305 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 FAM192AQ9GZU8 254 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 DUSP21Q9H596 190 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 HMG20AQ9NP66 347 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM138Q9NPI0 162 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 SIRT7Q9NRC8 400 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 C19orf12Q9NSK7 152 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 CKLFQ9UBR5 152 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 GLS2Q9UI32 602 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 GSTK1Q9Y2Q3 226 aa7.6□□□□□ -1.19
SNHG1-215ENST00000540904 SOX21Q9Y651 276 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-215ENST00000540904 WNK2Q9Y3S1 2297 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TRAV8-7A0A075B6U6 113 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TRBV23-1A0A0A0MS06 115 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 IGHV1-69DA0A0B4J2H0 117 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 K7N7A8 449 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 GABRPO00591 440 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 RGS10O43665 173 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 KDM4BO94953 1096 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 IGHV1-69P01742 117 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 HSMCR30P0CW71 290 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 GABRR1P24046 479 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 EEF1B2P24534 225 aaKnown RBP7.59□□□□□ -1.19
SNHG1-215ENST00000540904 BDKRB2P30411 391 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 EDDM3BP56851 147 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 HILS1P60008 231 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 SCN1BQ07699 218 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 BLMHQ13867 455 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 IRF3Q14653 427 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF146Q15072 292 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 SPIN3Q5JUX0 258 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 RBM48Q5RL73 367 aaKnown RBP7.59□□□□□ -1.19
SNHG1-215ENST00000540904 DDI2Q5TDH0 399 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TMEM200BQ69YZ2 307 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 GDPD3Q7L5L3 318 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 OR8H2Q8N162 312 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 Q8N7P7 452 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TNFAIP8L1Q8WVP5 186 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 DMRTB1Q96MA1 342 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 JMJD8Q96S16 334 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 ZNF184Q99676 751 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TMED9Q9BVK6 235 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 CHST6Q9GZX3 395 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 FAM234AQ9H0X4 552 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 Q9H521 79 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 ESM1Q9NQ30 184 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 LSM2Q9Y333 95 aaKnown RBP7.59□□□□□ -1.19
SNHG1-215ENST00000540904 CUBNO60494 3623 aa7.59□□□□□ -1.19
SNHG1-215ENST00000540904 TRBV5-7A0A0A0MS05 114 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 MDFIC2A0A1B0GVS7 189 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 TMEM82A0PJX8 343 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 MEX3AA1L020 520 aaKnown RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 MAGEA13PA6NCF6 341 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 M0R1W7 72 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 SIRPB1O00241 398 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 SH2D1BO14796 132 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 PSPNO60542 156 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 ZNF737O75373 536 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 OR2H2O95918 312 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 ALDOBP05062 364 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 CD1AP06126 327 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 IGFBP3P17936 291 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 ZNF93P35789 620 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 TGFBR2P37173 567 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 PTGFRP43088 359 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 MAP2K4P45985 399 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 OR3A4PP47883 348 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 BPIFB3P59826 476 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 ACSM1Q08AH1 577 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 EDDM3AQ14507 147 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 INSL4Q14641 139 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 RSU1Q15404 277 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 GRK1Q15835 563 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 C17orf107Q6ZR85 190 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms