RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 ZNF850A8MQ14 1090 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 ST8SIA3O43173 380 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 TNFSF12O43508 249 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 IFNA5P01569 189 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 FPR2P25090 351 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 SLC22A6Q4U2R8 563 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 OR5D14Q8NGL3 314 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 OR1N1Q8NGS0 311 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 ZPLD1Q8TCW7 415 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 RARRES2Q99969 163 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 PRTFDC1Q9NRG1 225 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 ANKRD10Q9NXR5 420 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 FKBP11Q9NYL4 201 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 STARD10Q9Y365 291 aa7.66□□□□□ -1.18
DDB1-217ENST00000540166 FIGNL2A6NMB9 653 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 H7BYZ3 331 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 UPK3AO75631 287 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 PPP1CCP36873 323 aaKnown RBP7.65□□□□□ -1.18
DDB1-217ENST00000540166 FXYD4P59646 89 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 SSPNQ14714 243 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 HERPUD1Q15011 391 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 NSDHLQ15738 373 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 ZNF658BQ4V348 819 aaPredicted RBP7.65□□□□□ -1.18
DDB1-217ENST00000540166 TMEM41BQ5BJD5 291 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 MARCH3Q86UD3 253 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 LRP11Q86VZ4 500 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 CMTM1Q8IZ96 169 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 ZNF664Q8N3J9 261 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 CISD2Q8N5K1 135 aaKnown RBP7.65□□□□□ -1.18
DDB1-217ENST00000540166 OR51T1Q8NGJ9 327 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 SCGB1C1Q8TD33 95 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 TMEM208Q9BTX3 173 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 TMEM59Q9BXS4 323 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 PNO1Q9NRX1 252 aaKnown RBP7.65□□□□□ -1.18
DDB1-217ENST00000540166 HSF4Q9ULV5 492 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 KLHDC2Q9Y2U9 406 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 RHBDD3Q9Y3P4 386 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 OBSL1O75147 1896 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 TRBV6-7A0A0A0MS04 114 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 TRGV8A0A0C4DH27 118 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 LOC107986453A0A1B0GWG9 222 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 P2RY10O00398 339 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 HCRTR2O43614 444 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 WISP1O95388 367 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 OPN1MWP04001 364 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 DANCRP0C864 163 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 OPN1MW2P0DN77 364 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 OPN1MW3P0DN78 364 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 GLI4P10075 376 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 TMEM183AQ8IXX5 376 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 C17orf78Q8N4C9 275 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 RPS4Y2Q8TD47 263 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 RNF128Q8TEB7 428 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 R3HDM4Q96D70 268 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 PRORYQ9H606 182 aa7.65□□□□□ -1.18
DDB1-217ENST00000540166 PLXNB3Q9ULL4 1909 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 PIEZO2Q9H5I5 2752 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 TRBV5-7A0A0A0MS05 114 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 HSPB2A8KAH6 182 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CTSVO60911 334 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CXCL1P09341 107 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CT62P0C5K7 136 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 OR5AC1P0C628 307 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 ZNF735P0CB33 412 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 FGF5P12034 268 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CD46P15529 392 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CCKARP32238 428 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 SFTPDP35247 375 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 ASCL1P50553 236 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 SNU13P55769 128 aaKnown RBP7.65□□□□□ -1.19
DDB1-217ENST00000540166 PPP1CAP62136 330 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 ELOBQ15370 118 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 HSPB2Q16082 182 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 THEM4Q5T1C6 240 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 TOMM20LQ6UXN7 152 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 MEX3BQ6ZN04 569 aaKnown RBP7.65□□□□□ -1.19
DDB1-217ENST00000540166 SMIM15Q7Z3B0 74 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 CYB561D1Q8N8Q1 229 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 OR51A2Q8NGJ7 313 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 OR1P1Q8NH06 330 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 OR8D2Q9GZM6 311 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.19
DDB1-217ENST00000540166 COPS7AQ9UBW8 275 aa7.65□□□□□ -1.19
DDB1-217ENST00000540166 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 B4DEV8 164 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 PGA3P0DJD8 388 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 PNMTP11086 282 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 APLNRP35414 380 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 ZNF93P35789 620 aaPredicted RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 ERVFC1-1P60608 527 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 MRPS34P82930 218 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 D2HGDHQ8N465 521 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 BHLHE23Q8NDY6 225 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 OR1L3Q8NH93 324 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 SYT3Q9BQG1 590 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 BANF2Q9H503 90 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 TRIOO75962 3097 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 SERINC4A6NH21 518 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms