RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 MPV17LQ2QL34 196 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 AADACL3Q5VUY0 350 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 AAED1Q7RTV5 226 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
MSH6-210ENST00000540021 OSR2Q8N2R0 312 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 DOK5Q9P104 306 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 PTRH2Q9Y3E5 179 aaKnown RBP11.36□□□□□ -0.59
MSH6-210ENST00000540021 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 P2RY1P47900 373 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 FAM3AP98173 230 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 WDR5BQ86VZ2 330 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 IL22RA1Q8N6P7 574 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 MVB12AQ96EY5 273 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 P4HTMQ9NXG6 502 aa11.36□□□□□ -0.59
MSH6-210ENST00000540021 CACNA1EQ15878 2313 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 HBE1P02100 147 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 CD63P08962 238 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 TCN2P20062 427 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 HYAL1Q12794 435 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 ZNF154Q13106 437 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 UBE2V2Q15819 145 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 MRPL21Q7Z2W9 205 aaKnown RBP11.35□□□□□ -0.59
MSH6-210ENST00000540021 POM121Q96HA1 1249 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 UCN2Q96RP3 112 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 HSF4Q9ULV5 492 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 C9J4A7 227 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 LDLRAD4O15165 306 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 IGKV3-11P04433 115 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 SEC11BP0C7V7 166 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 AADACP22760 399 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 DYNLT3P51808 116 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 DCDP81605 110 aaKnown RBP11.35□□□□□ -0.59
MSH6-210ENST00000540021 SMAD4Q13485 552 aaKnown RBP11.35□□□□□ -0.59
MSH6-210ENST00000540021 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 MCEMP1Q8IX19 187 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 CDCA3Q99618 268 aaPredicted RBP11.35□□□□□ -0.59
MSH6-210ENST00000540021 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 TNFSF11O14788 317 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 SPANXN5Q5MJ07 72 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
MSH6-210ENST00000540021 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 FAM210BQ96KR6 192 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 ABHD14AQ9BUJ0 271 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 SLC39A9Q9NUM3 307 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 LAMP3Q9UQV4 416 aa11.35□□□□□ -0.59
MSH6-210ENST00000540021 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 LILRA5A6NI73 299 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 EIF1BO60739 113 aaKnown RBP11.34□□□□□ -0.59
MSH6-210ENST00000540021 EIF1P41567 113 aaKnown RBP11.34□□□□□ -0.59
MSH6-210ENST00000540021 FASLGP48023 281 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 FBXO46Q6PJ61 603 aaPredicted RBP11.34□□□□□ -0.59
MSH6-210ENST00000540021 BTNL8Q6UX41 500 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 SHANK1Q9Y566 2161 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 C3orf85A0A1B0GTC6 90 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 WIPF3A6NGB9 483 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 ZNF880Q6PDB4 577 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 TMEM100Q9NV29 134 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 WNT16Q9UBV4 365 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 OSGIN2Q9Y236 505 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 A0A096LPE4 126 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 A0A1W2PPZ6 126 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 GAPDHP04406 335 aaKnown RBP11.34□□□□□ -0.59
MSH6-210ENST00000540021 MMP9P14780 707 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 CD27P26842 260 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 DNM1P46Q6ZS02 220 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 MKXQ8IYA7 352 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 CA5BP1Q8WTZ4 195 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 PSMF1Q92530 271 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 ZNF385AQ96PM9 386 aaKnown RBP11.34□□□□□ -0.59
MSH6-210ENST00000540021 PLEKHF2Q9H8W4 249 aa11.34□□□□□ -0.59
MSH6-210ENST00000540021 IGHV1OR21-1A0A087WYE8 117 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 A0A087X0M5 115 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 A0A1B0GX30 115 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 TRAPPC2LH3BP13 241 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 YKT6O15498 198 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 FCGR3AP08637 254 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 BMP5P22003 454 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 OTX2P32243 289 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 SURF2Q15527 256 aaPredicted RBP11.33□□□□□ -0.6
MSH6-210ENST00000540021 SLC25A43Q8WUT9 341 aaPredicted RBP11.33□□□□□ -0.6
MSH6-210ENST00000540021 NAT6Q93015 286 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 GNPNAT1Q96EK6 184 aaPredicted RBP11.33□□□□□ -0.6
MSH6-210ENST00000540021 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
MSH6-210ENST00000540021 C5orf63A6NC05 138 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 C5orf52A6NGY3 159 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 CLDN1O95832 211 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 G0S2P27469 103 aa11.33□□□□□ -0.6
MSH6-210ENST00000540021 MSX1P28360 303 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms