RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 HMG20AQ9NP66 347 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 SIRT7Q9NRC8 400 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 SCN3BQ9NY72 215 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 ERGIC3Q9Y282 383 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 LSM2Q9Y333 95 aaKnown RBP15.03■□□□□ -0
SNRPA1-203ENST00000540017 A0A1W2PQ09 198 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 HAND1O96004 215 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 CD2P06729 351 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 CHRM2P08172 466 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 CELP19835 753 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 HSPA13P48723 471 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 TAS2R43P59537 309 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 IRF3Q14653 427 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 PDCD1Q15116 288 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 YIF1BQ5BJH7 314 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 C17orf107Q6ZR85 190 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 SAXO1Q8IYX7 474 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 FAM185AQ8N0U4 392 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.02■□□□□ -0
SNRPA1-203ENST00000540017 ASCC1Q8N9N2 400 aaKnown RBP15.02■□□□□ -0
SNRPA1-203ENST00000540017 TNFRSF14Q92956 283 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 MYDGFQ969H8 173 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 CNBD2Q96M20 576 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 DUX5Q96PT3 197 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 DUSP21Q9H596 190 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 NEK6Q9HC98 313 aa15.02■□□□□ -0
SNRPA1-203ENST00000540017 TRBV5-7A0A0A0MS05 114 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 TRBV23-1A0A0A0MS06 115 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 IGHV1-69DA0A0B4J2H0 117 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 RNASEK-C17orf49H0YIS7 233 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 GABRPO00591 440 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 PSPNO60542 156 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 IGHV1-69P01742 117 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 TMEM225BP0DP42 221 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 IGFBP3P17936 291 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 CRHBPP24387 322 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 RPL31P62899 125 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 KLRD1Q13241 179 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 ZNF146Q15072 292 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 DEFB112Q30KQ8 113 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 Q499Y3 187 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 TMEM200BQ69YZ2 307 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 SATL1Q86VE3 508 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 CMTM4Q8IZR5 234 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 OR14A2Q96R54 314 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 MND1Q9BWT6 205 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 FAM234AQ9H0X4 552 aa15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 SEBOXQ9HB31 216 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-203ENST00000540017 TRAV8-7A0A075B6U6 113 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 A0A1W2PPK0 400 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 MEX3AA1L020 520 aaKnown RBP15□□□□□ -0.01
SNRPA1-203ENST00000540017 MAGEA13PA6NCF6 341 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 M0R1W7 72 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 CD1AP06126 327 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 VHLP40337 213 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 BPIFB3P59826 476 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 ERVFRD-1P60508 538 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 ACSM1Q08AH1 577 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 ZNF273Q14593 569 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 C1orf122Q6ZSJ8 110 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 C11orf42Q8N5U0 333 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 ZSCAN4Q8NAM6 433 aaPredicted RBP15□□□□□ -0.01
SNRPA1-203ENST00000540017 SNX22Q96L94 193 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 JMJD8Q96S16 334 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 GSTK1Q9Y2Q3 226 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 TPRKBQ9Y3C4 175 aa15□□□□□ -0.01
SNRPA1-203ENST00000540017 DNAJC9-AS1A6NH13 148 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 PIN1P1O15428 100 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 GPX5O75715 221 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 ALDOBP05062 364 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 CCL3L1P16619 93 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 OR3A4PP47883 348 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 UBA52P62987 128 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 BDH1Q02338 343 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 INSL4Q14641 139 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 SPHARQ15513 63 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 SPIN3Q5JUX0 258 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 METAP1DQ6UB28 335 aaPredicted RBP14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 RBMS3Q6XE24 437 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 OR8H2Q8N162 312 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 OR4S1Q8NGB4 309 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 SPATA3Q8NHX4 192 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 TNFAIP8L1Q8WVP5 186 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 GPER1Q99527 375 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 CHST6Q9GZX3 395 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 PRDM13Q9H4Q3 707 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 TMEM138Q9NPI0 162 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 RAB26Q9ULW5 256 aa14.99□□□□□ -0.01
SNRPA1-203ENST00000540017 A0A1W2PRD5 423 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 A0A1W2PRF3 423 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 A0A1W2PRM7 423 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 SIRPB1O00241 398 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 MAGEB3O15480 346 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 OR2H2O95918 312 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 GABRR1P24046 479 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 PRTN3P24158 256 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 BDKRB2P30411 391 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 DLX6P56179 175 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 PPP3R1P63098 170 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms