RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SMIM7Q9BQ49 75 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ESRP2Q9H6T0 727 aaKnown RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 OR5H15A6NDH6 313 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 FAM24AA6NFZ4 105 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 SIRPB1O00241 398 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ZNF385CQ66K41 422 aaPredicted RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 MRPL14Q6P1L8 145 aaKnown RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 PRSS54Q6PEW0 395 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 IL34Q6ZMJ4 242 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 SLC25A38Q96DW6 304 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 RAB18Q9NP72 206 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 RPH3ALQ9UNE2 315 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ADAMTS9Q9P2N4 1935 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 FAM74A7A6NL05 159 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 ICAM2P13598 275 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 IRF2P14316 349 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 PPIAP62937 165 aaKnown RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 ZNF528Q3MIS6 628 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 FAM74A3Q4VXF1 159 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 NCMAPQ5T1S8 102 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 PEAR1Q5VY43 1037 aaPredicted RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 ZNF787Q6DD87 383 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 C6orf15Q6UXA7 325 aaPredicted RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 OR2Y1Q8NGV0 311 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 OR4F5Q8NH21 305 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 OR4F4Q96R69 305 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 TOLLIPQ9H0E2 274 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 SLC26A1Q9H2B4 701 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 MRPS18BQ9Y676 258 aaKnown RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 MDFIC2A0A1B0GVS7 189 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 CRYBA1P05813 215 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 OR5AC1P0C628 307 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 NFYBP25208 207 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 FOXK1P85037 733 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 ZFP36L1Q07352 338 aaKnown RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 NOXO1Q8NFA2 376 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 PP6455Q8WZ26 134 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 MCHR2Q969V1 340 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 FBXO17Q96EF6 278 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 NPAS1Q99742 590 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 UTP23Q9BRU9 249 aaKnown RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 STRAPQ9Y3F4 350 aaKnown RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 hCG_1809904A0A1W2PP81 198 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 A0A1W2PR64 198 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 A0A1W2PRV1 198 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 LNP1A1A4G5 178 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 FABP1P07148 127 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 DVL1P1P54792 670 aaPredicted RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 H2BFSP57053 126 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 SSTP61278 116 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 GGTLC2Q14390 218 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 GUCA2BQ16661 112 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 PNLIPRP3Q17RR3 467 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 ZNF660Q6AZW8 331 aaPredicted RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 RGP1Q92546 391 aaPredicted RBP8.79□□□□□ -1
TRAF1-202ENST00000540010 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 SH3BGRL2Q9UJC5 107 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 WSB1Q9Y6I7 421 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 ABCA1O95477 2261 aa8.79□□□□□ -1
TRAF1-202ENST00000540010 A0A1W2PP11 408 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CDC14BO60729 498 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 GP1BAP07359 652 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 SCAND1P57086 179 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 DEGS2Q6QHC5 323 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 OR5C1Q8NGR4 320 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 OR8U1Q8NH10 309 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 LAMP3Q9UQV4 416 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 TTC28Q96AY4 2481 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 MPDZO75970 2070 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 RNF212BA8MTL3 300 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 TIMM8AO60220 97 aaPredicted RBP8.78□□□□□ -1
TRAF1-202ENST00000540010 FAM157BP0CG42 384 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 VSIG8P0DPA2 414 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 MEOX2P50222 304 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CLN3Q13286 438 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 PCOLCEQ15113 449 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 SPATA46Q5T0L3 261 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 APH1AQ96BI3 265 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 GHRLQ9UBU3 117 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 ZNF98A6NK75 572 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 FIGNL2A6NMB9 653 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CDRT15L2A8MXV6 281 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 WISP1O95388 367 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CD63P08962 238 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 SPP1P10451 314 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 FABP4P15090 132 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 IL11P20809 199 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 ZNF273Q14593 569 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 MICBQ29980 383 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 OR4A16Q8NH70 328 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 POC1BQ8TC44 478 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CYB5R1Q9UHQ9 305 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 HS3ST3B1Q9Y662 390 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CACNA1HO95180 2353 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 A0A1W2PPH5 198 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 MASP2O00187 686 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 CDK2AP1O14519 115 aa8.78□□□□□ -1
TRAF1-202ENST00000540010 IGHEP01854 428 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms