RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 RTL6Q6ICC9 239 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 UFSP1Q6NVU6 142 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 SERPINA9Q86WD7 417 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM130Q8N3G9 435 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 IL22RA1Q8N6P7 574 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 PNPLA1Q8N8W4 532 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 OR5AK3PQ8NH89 298 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 SLC25A40Q8TBP6 338 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 RNF133Q8WVZ7 376 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 DVL3Q92997 716 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM230Q96A57 120 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF681Q96N22 645 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 RARRES2Q99969 163 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 SPATA25Q9BR10 227 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 RTBDNQ9BSG5 229 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-211ENST00000539921 MED10Q9BTT4 135 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 NUDT9Q9BW91 350 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 STRADBQ9C0K7 418 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 LPAR5Q9H1C0 372 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 PARLQ9H300 379 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 C12orf49Q9H741 205 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 METTL7AQ9H8H3 244 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 ST20Q9HBF5 79 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 DMRT3Q9NQL9 472 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 TUBG2Q9NRH3 451 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 DECR2Q9NUI1 292 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 TAAR2Q9P1P5 351 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 CKLFQ9UBR5 152 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 HSF4Q9ULV5 492 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 LIPGQ9Y5X9 500 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 HS3ST4Q9Y661 456 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM14AQ9Y6G1 99 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 DOCK4Q8N1I0 1966 aa5.38□□□□□ -1.55
SNHG1-211ENST00000539921 SCN1AP35498 2009 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 NSG1A0A0A6YYJ2 146 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 SLC38A8A6NNN8 435 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 TAX1BP3O14907 124 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 LATO43561 262 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 RBMXL2O75526 392 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 UPK3AO75631 287 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF205O95201 554 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 CDS2O95674 445 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 MT-ND6P03923 174 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 CTSBP07858 339 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 HNRNPA1P09651 372 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 IFI6P09912 130 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 LINC00869P0C866 280 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 PRSS56P0CW18 603 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 HNRNPA2B1P22626 353 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 F2RP25116 425 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 LMO2P25791 158 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 SERPINA4P29622 427 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 OR1D2P34982 312 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 RAB9AP51151 201 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 MANFP55145 182 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 FOXL2P58012 376 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 S100A10P60903 97 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 CKS1BP61024 79 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 GNB2P62879 340 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 SUPT4H1P63272 117 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 C17orf67Q0P5P2 114 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 EIF3IQ13347 325 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 PDGFRLQ15198 375 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 CEBPEQ15744 281 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 IAH1Q2TAA2 248 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ARHGAP11BQ3KRB8 267 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 OR10J3Q5JRS4 329 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 YOD1Q5VVQ6 348 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 WDR25Q64LD2 544 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 WDR82Q6UXN9 313 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 FOXI2Q6ZQN5 318 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF765Q7L2R6 523 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 TCEAL8Q8IYN2 117 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 UBALD2Q8IYN6 164 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 FAM58AQ8N1B3 248 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 NXPE1Q8N323 547 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ARHGEF39Q8N4T4 335 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF709Q8N972 641 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 Q8N976 141 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ADAD2Q8NCV1 583 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 OR4F17Q8NGA8 305 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 OR2Y1Q8NGV0 311 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF596Q8TC21 504 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ACER1Q8TDN7 264 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 FAM46BQ96A09 425 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 OR4F4Q96R69 305 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 GPX7Q96SL4 187 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 NKX2-4Q9H2Z4 354 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 C5orf66Q9H5L9 145 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 ZDHHC6Q9H6R6 413 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 G6PC2Q9NQR9 355 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 FAM206AQ9NX38 181 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 MMP17Q9ULZ9 603 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 B3GALT5Q9Y2C3 310 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 PTRH2Q9Y3E5 179 aaKnown RBP5.37□□□□□ -1.55
SNHG1-211ENST00000539921 MYO16Q9Y6X6 1858 aa5.37□□□□□ -1.55
SNHG1-211ENST00000539921 NUP214P35658 2090 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms