RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NANPQ8TBE9 248 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 NUDCD2Q8WVJ2 157 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAHD2AQ96GK7 314 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 FGF16O43320 207 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 ERCC1P07992 297 aaPredicted RBP14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 HRH1P35367 487 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 ZNF92Q03936 586 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 UBE2V2Q15819 145 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 RTL6Q6ICC9 239 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAM180AQ6UWF9 173 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 NPRL2Q8WTW4 380 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 GLYATL2Q8WU03 294 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAM46BQ96A09 425 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 C1QTNF5Q9BXJ0 243 aa14.75□□□□□ -0.05
PCDHB17P-201ENST00000539533 LYZL6O75951 148 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 IFNA4P05014 189 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 HCKP08631 526 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 AKR1C4P17516 323 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 THBS4P35443 961 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 TMPRSS3P57727 454 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 BLOC1S1P78537 153 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 TSC22D1Q15714 1073 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 RPRMLQ8N4K4 120 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 PAQR4Q8N4S7 273 aaPredicted RBP14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 Q8NA96 180 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 SEMA6DQ8NFY4 1073 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 STOML3Q8TAV4 291 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 PIK3IP1Q96FE7 263 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 ZZEF1O43149 2961 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 A0A1W2PR80 420 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 RAD51DO75771 328 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 EIF3GO75821 320 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 DUS4LO95620 317 aaKnown RBP14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 CRHP06850 196 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAM87AP0C7U9 286 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 PGAM2P15259 253 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 PSMB6P28072 239 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 UNC119Q13432 240 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 OR2A2Q6IF42 318 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 Q6ZT83 130 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 ANGPTL5Q86XS5 388 aa14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 CISD2Q8N5K1 135 aaKnown RBP14.74□□□□□ -0.05
PCDHB17P-201ENST00000539533 C5orf51A6NDU8 294 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 F8VVB4 439 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 F8VWA3 439 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 TNFSF13O75888 250 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 F12P00748 615 aaPredicted RBP14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 CRYBA1P05813 215 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 AVPI1Q5T686 147 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 COLCA1Q6ZS62 124 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 CHST5Q9GZS9 411 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 FN3KRPQ9HA64 309 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 CHMP1AQ9HD42 196 aaPredicted RBP14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 ZNF629Q9UEG4 869 aaPredicted RBP14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAM215AQ9Y5M1 114 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 MYO7BQ6PIF6 2116 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 ACAA1P09110 424 aaPredicted RBP14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 COX5BP10606 129 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 FAM3AP98173 230 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 PLP2Q04941 152 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 ZNF324BQ6AW86 544 aaPredicted RBP14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 MDP1Q86V88 176 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 SSC4DQ8WTU2 575 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 PP6455Q8WZ26 134 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 POM121L2Q96KW2 1035 aa14.73□□□□□ -0.05
PCDHB17P-201ENST00000539533 PIEZO1Q92508 2521 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 TRAV20A0A0B4J274 112 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 TEX13DA0A0J9YY54 714 aaPredicted RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 C13orf42A0A1B0GVH6 325 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 MBD3L4A6NDZ8 208 aaPredicted RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 MBD3L3A6NE82 208 aaPredicted RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 MBD3L5A6NJ08 208 aaPredicted RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 DBX1A6NMT0 343 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 IFNA6P05013 189 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 TPT1P13693 172 aaKnown RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 SERPINF1P36955 418 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 OR3A4PP47883 348 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 GSK3AP49840 483 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 QRFPP83859 136 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 AWAT2Q6E213 333 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 CRIP3Q6Q6R5 217 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 MBD3L2Q8NHZ7 208 aaPredicted RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 DCUN1D4Q92564 292 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 STARD4Q96DR4 205 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 GPR173Q9NS66 373 aa14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 INTS1Q8N201 2190 aaKnown RBP14.72□□□□□ -0.05
PCDHB17P-201ENST00000539533 hCG_38984A0A1B0GV85 526 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 NGFP01138 241 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 FABP1P07148 127 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 GNB3P16520 340 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 NPBWR1P48145 328 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 TGFBR3Q03167 851 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 CCDC54Q8NEL0 328 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 SLC30A7Q8NEW0 376 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 RXFP4Q8TDU9 374 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 C10orf35Q96D05 121 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 GPER1Q99527 375 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 RGCCQ9H4X1 137 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 PLSCR4Q9NRQ2 329 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms