RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 BRWD3Q6RI45 1802 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 BLMP54132 1417 aaPredicted RBP3.31□□□□□ -1.88
TRAV11-201ENST00000539512 E7EWF7 191 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 MLNP12872 115 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF35P13682 527 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 FMODQ06828 376 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF235Q14590 738 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 IHHQ14623 411 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 DEFB134Q4QY38 66 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 C6orf183Q5T699 404 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 SETD3Q86TU7 594 aaPredicted RBP3.31□□□□□ -1.88
TRAV11-201ENST00000539512 CYP4Z2PQ8N1L4 340 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF664Q8N3J9 261 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 OR52K1Q8NGK4 314 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 THTPAQ9BU02 230 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 BEX2Q9BXY8 128 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 PLA2G12AQ9BZM1 189 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 SRRQ9GZT4 340 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 PARP11Q9NR21 331 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 ASF1BQ9NVP2 202 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 TAC3Q9UHF0 121 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 SCN1AP35498 2009 aa3.31□□□□□ -1.88
TRAV11-201ENST00000539512 CEP170BQ9Y4F5 1589 aaPredicted RBP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 RPRD2Q5VT52 1461 aaKnown RBP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 MAGI2Q86UL8 1455 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 BCL9LQ86UU0 1499 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 NPATQ14207 1427 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 TMEM94Q12767 1356 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 RFXANKO14593 260 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 CPN2P22792 545 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 NUP62P37198 522 aaPredicted RBP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 OR8K3Q8NH51 312 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 ITLN2Q8WWU7 325 aaPredicted RBP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 ZBED3Q96IU2 234 aaPredicted RBP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 QKIQ96PU8 341 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAV11-201ENST00000539512 CHID1Q9BWS9 393 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 VAPAQ9P0L0 249 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 ANXA10Q9UJ72 324 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 NHSL1Q5SYE7 1610 aa3.3□□□□□ -1.88
TRAV11-201ENST00000539512 ABCA8O94911 1581 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ZMYM4Q5VZL5 1548 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ATP10BO94823 1461 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 PLCH2O75038 1416 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 KIF27Q86VH2 1401 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 TVP23AA6NH52 213 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 D6RAR5 112 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 UPK2O00526 184 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 SLC37A4O43826 429 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 CSTAP01040 98 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 IGKV1D-16P01601 117 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 LIPCP11150 499 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 GZMAP12544 262 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 DYNC1I2Q13409 638 aaKnown RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 UBE2NLQ5JXB2 153 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ASCL4Q6XD76 172 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 CYP4Z1Q86W10 505 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 OR4C13Q8NGP0 309 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 OR6K2Q8NGY2 324 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 CIDECQ96AQ7 238 aaPredicted RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 OTUB2Q96DC9 234 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 SPACA5Q96QH8 159 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 OR2V2Q96R30 315 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 TSGA10Q9BZW7 698 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ABCG5Q9H222 651 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 VSIRQ9H7M9 311 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 FAM60AQ9NP50 221 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 C12orf4Q9NQ89 552 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 NLE1Q9NVX2 485 aaPredicted RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 SDHAF2Q9NX18 166 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF230Q9UIE0 474 aaPredicted RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 TRAPPC1Q9Y5R8 145 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 ROBO1Q9Y6N7 1651 aa3.29□□□□□ -1.88
TRAV11-201ENST00000539512 CDK13Q14004 1512 aaKnown RBP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.29□□□□□ -1.88
TRAV11-201ENST00000539512 COL27A1Q8IZC6 1860 aaPredicted RBP3.28□□□□□ -1.88
TRAV11-201ENST00000539512 RTEL1-TNFRSF6BF6WH68 1400 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 RICTORQ6R327 1708 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 GSTTP1A0A1W2PQM5 241 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 GMNCA6NCL1 334 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 GMDSO60547 372 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 DSTNP60981 165 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 LIN9Q5TKA1 542 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 SLC25A25Q6KCM7 469 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 C16orf87Q6PH81 154 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 ZNF773Q6PK81 442 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 TMEM144Q7Z5S9 345 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 UBA3Q8TBC4 463 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 VAT1Q99536 393 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 COPS4Q9BT78 406 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 PORCNQ9H237 461 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 DDIT4Q9NX09 232 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 DNAJC27Q9NZQ0 273 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 ACOT9Q9Y305 439 aa3.28□□□□□ -1.88
TRAV11-201ENST00000539512 ABCA9Q8IUA7 1624 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms