RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ACTG1P63261 375 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 SCN1BQ07699 218 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 ARFRP1Q13795 201 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 TAF9Q16594 264 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 PNLIPRP3Q17RR3 467 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 ZNF826PQ6ZT77 177 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A1Q86YD7 464 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 Q8TCH9 128 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 AUNIPQ9H7T9 357 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 DYSFO75923 2080 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 SOCS1O15524 211 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 KNG1P01042 644 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 LPLP06858 475 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 IL7P13232 177 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF44P15621 663 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 FUT3P21217 361 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 ERVK11-1P61568 191 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 RBM39Q14498 530 aaKnown RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 MST1LQ2TV78 715 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 RNASE12Q5GAN4 147 aaKnown RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 CLEC18BQ6UXF7 455 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 BOLLQ8N9W6 283 aaKnown RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 ABHD1Q96SE0 405 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 CLEC4MQ9H2X3 399 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-207ENST00000539047 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 IFT46Q9NQC8 304 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 TAS2R8Q9NYW2 309 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 HSF4Q9ULV5 492 aa13.02□□□□□ -0.33
VAMP1-207ENST00000539047 RAI1Q7Z5J4 1906 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 ISPDA4D126 451 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 DEGS1O15121 323 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 CD3GP09693 182 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 GNB3P16520 340 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 CBX5P45973 191 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 HFEQ30201 348 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 ARHGAP5-AS1Q96IT6 56 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 THAP7Q9BT49 309 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 TRAF4Q9BUZ4 470 aaPredicted RBP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 PECRQ9BY49 303 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
VAMP1-207ENST00000539047 OR14J1Q9UGF5 321 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 PLEKHA6Q9Y2H5 1048 aa13.01□□□□□ -0.33
VAMP1-207ENST00000539047 NBPF19A0A087WUL8 3843 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 IGHV1-69-2A0A0G2JMI3 117 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 CENPXA8MT69 81 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 MCRIP1C9JLW8 97 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 MFNGO00587 321 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 CA11O75493 328 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 RBBP9O75884 186 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 ECDO95905 644 aaPredicted RBP13□□□□□ -0.33
VAMP1-207ENST00000539047 CHATP28329 748 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 DGCR2P98153 550 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF260Q3ZCT1 412 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 SP5Q6BEB4 398 aaPredicted RBP13□□□□□ -0.33
VAMP1-207ENST00000539047 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 BIVMQ86UB2 503 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 IFT22Q9H7X7 185 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 ZMAT3Q9HA38 289 aaKnown RBP13□□□□□ -0.33
VAMP1-207ENST00000539047 NLKQ9UBE8 527 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 LAMP3Q9UQV4 416 aa13□□□□□ -0.33
VAMP1-207ENST00000539047 A0A1W2PQ09 198 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 F8VVB4 439 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 F8VWA3 439 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 CLDN1O95832 211 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 HAND1O96004 215 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 GLAP06280 429 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 CSF1P09603 554 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 CSF3P09919 207 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 DANCRP0C864 163 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 RCVRNP35243 200 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 FAUP35544 74 aaKnown RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 MDH2P40926 338 aaKnown RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 PMELP40967 661 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF146Q15072 292 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 KCNJ8Q15842 424 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms