RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 FGF20Q9NP95 211 aaPredicted RBP17.52■□□□□ 0.4
CCDC78-215ENST00000538176 A0A1W2PRD5 423 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 A0A1W2PRF3 423 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 A0A1W2PRM7 423 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 hADV38S2A0JD32 116 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 F8VVB4 439 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 F8VWA3 439 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 HAND1O96004 215 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 POU3F4P49335 361 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 EDDM3BP56851 147 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 HCP5Q6MZN7 132 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 BATF2Q8N1L9 274 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 PARP16Q8N5Y8 322 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 SETD9Q8NE22 299 aa17.51■□□□□ 0.39
CCDC78-215ENST00000538176 ISG20L2Q9H9L3 353 aaKnown RBP17.51■□□□□ 0.39
CCDC78-215ENST00000538176 FUOMA2VDF0 154 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 SH2D1BO14796 132 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 ZFPL1O95159 310 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 ZNF728P0DKX0 622 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 RELBQ01201 579 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 MED21Q13503 144 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 TAF9Q16594 264 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 DHRS7BQ6IAN0 325 aaPredicted RBP17.5■□□□□ 0.39
CCDC78-215ENST00000538176 TMPRSS11AQ6ZMR5 421 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 OR51A4Q8NGJ6 313 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 OR13D1Q8NGV5 346 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 APH1BQ8WW43 257 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 HMG20AQ9NP66 347 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 DHDHQ9UQ10 334 aa17.5■□□□□ 0.39
CCDC78-215ENST00000538176 MGST3O14880 152 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 INMTO95050 263 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 ERP29P30040 261 aaKnown RBP17.49■□□□□ 0.39
CCDC78-215ENST00000538176 BMXP51813 675 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 DLX1P56177 255 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 PRB3Q04118 309 aaPredicted RBP17.49■□□□□ 0.39
CCDC78-215ENST00000538176 ZNF273Q14593 569 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 RPL22L1Q6P5R6 122 aaKnown RBP17.49■□□□□ 0.39
CCDC78-215ENST00000538176 OR13C9Q8NGT0 318 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 C16orf95Q9H693 158 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 RAB18Q9NP72 206 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 RBFOX1Q9NWB1 397 aaKnown RBP17.49■□□□□ 0.39
CCDC78-215ENST00000538176 RNF114Q9Y508 228 aa17.49■□□□□ 0.39
CCDC78-215ENST00000538176 MAGEB3O15480 346 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 SULT1B1O43704 296 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 TSPAN9O75954 239 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 KDM4BO94953 1096 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 CCL3L1P16619 93 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 PRKACAP17612 351 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 BCL3P20749 454 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 GABRR1P24046 479 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 NPBWR2P48146 333 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 IL18R1Q13478 541 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 GRK1Q15835 563 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 ZNF691Q5VV52 312 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 PNKDQ8N490 385 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 OR10AC1Q8NH08 325 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 LINC01006Q8NI28 216 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 WFDC12Q8WWY7 111 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 ZNF714Q96N38 554 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 SSX3Q99909 188 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 TBL2Q9Y4P3 447 aaKnown RBP17.48■□□□□ 0.39
CCDC78-215ENST00000538176 LINC00312Q9Y6C7 94 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 HSPE1-MOB4S4R3N1 261 aa17.48■□□□□ 0.39
CCDC78-215ENST00000538176 WBP4O75554 376 aaKnown RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 CD2P06729 351 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 HCKP08631 526 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 LIMS3P0CW19 117 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 LIMS4P0CW20 117 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 PIPP12273 146 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 MYL12AP19105 171 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 LMO1P25800 156 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 DLX6P56179 175 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 LRRC75BQ2VPJ9 315 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 LIAT1Q6ZQX7 453 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 DHRSXQ8N5I4 330 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 CHST4Q8NCG5 386 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 TSEN15Q8WW01 171 aaKnown RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 TAF15Q92804 592 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 PDCD1LG2Q9BQ51 273 aa17.47■□□□□ 0.39
CCDC78-215ENST00000538176 EXOSC4Q9NPD3 245 aaKnown RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 CHCHD3Q9NX63 227 aaKnown RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-215ENST00000538176 TMEM82A0PJX8 343 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 CLPXO76031 633 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 KISS1Q15726 138 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 OR11H6Q8NGC7 330 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 GPR148Q8TDV2 347 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 FOXRED1Q96CU9 486 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-215ENST00000538176 MALSU1Q96EH3 234 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 CDCA4Q9BXL8 241 aa17.46■□□□□ 0.39
CCDC78-215ENST00000538176 UBE2J1Q9Y385 318 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-215ENST00000538176 EXOSC1Q9Y3B2 195 aaKnown RBP17.46■□□□□ 0.39
CCDC78-215ENST00000538176 FAM90A8PA6NJQ4 464 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 E9PI62 339 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 H3BUX3 64 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 IGHV1-8P0DP01 117 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 TMEM225BP0DP42 221 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 RAB3AP20336 220 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 LRRC36Q1X8D7 754 aa17.45■□□□□ 0.38
CCDC78-215ENST00000538176 Q6ZSV7 163 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms