RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CASC3O15234 703 aaKnown RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 RNF113AO15541 343 aaKnown RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 COX7A2P2O60397 106 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 POP7O75817 140 aaKnown RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 TRBC1P01850 177 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 KLK1P06870 262 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 RALBP11234 206 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 GTF2F2P13984 249 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 PMCHP20382 165 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 MSR1P21757 451 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 GBE1Q04446 702 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 PIP5KL1Q5T9C9 394 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 MRPL21Q7Z2W9 205 aaKnown RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 TMCO2Q7Z6W1 182 aaPredicted RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 OR6K6Q8NGW6 343 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 CERS2Q96G23 380 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 IL22Q9GZX6 179 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 C8orf33Q9H7E9 229 aaPredicted RBP1.22□□□□□ -2.21
CCDC7-208ENST00000537047 KIR3DX1Q9H7L2 352 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 PRSS16Q9NQE7 514 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 CHRAC1Q9NRG0 131 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 SDHAF3Q9NRP4 125 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 SLC7A11Q9UPY5 501 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 U3KQK5 164 aa1.22□□□□□ -2.21
CCDC7-208ENST00000537047 SBNO1A3KN83 1393 aa1.21□□□□□ -2.21
CCDC7-208ENST00000537047 VWDEQ8N2E2 1590 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 LOC389332A0A1B0GUA5 103 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 A0A1W2PRF3 423 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 A0A1W2PRM7 423 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 ZNF99A8MXY4 864 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 H0YIV9 168 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 H7C2Y5 167 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 STAG3L3P0CL85 134 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 SCGB1C2P0DMR2 95 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 HTR2CP28335 458 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 ZNF140P52738 457 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 HCCSP53701 268 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 PSMD4P55036 377 aaKnown RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 CLDN8P56748 225 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 DAOAP59103 153 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 LCN2P80188 198 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 SPAG1Q07617 926 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 NOXRED1Q6NXP6 359 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 UGT2A3Q6UWM9 527 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 CYHR1Q6ZMK1 362 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 SLC35D2Q76EJ3 337 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 OR2W3Q7Z3T1 314 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 DPPA2Q7Z7J5 298 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 OR2K2Q8NGT1 345 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 SCGB1C1Q8TD33 95 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 C22orf15Q8WYQ4 148 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 TNFRSF14Q92956 283 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 TSNAXQ99598 290 aaKnown RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 TXNDC17Q9BRA2 123 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 BLZF1Q9H2G9 400 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 ASB7Q9H672 318 aa1.21□□□□□ -2.22
CCDC7-208ENST00000537047 PEF1Q9UBV8 284 aaKnown RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 ZNF706Q9Y5V0 76 aaPredicted RBP1.21□□□□□ -2.22
CCDC7-208ENST00000537047 A0A1B0GTQ1 180 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 FAM240AA0A1B0GVK7 77 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 CD300LBA8K4G0 201 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 LY6LH3BQJ8 138 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 AKR7A2O43488 359 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 OPN1SWP03999 348 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 RHOCP08134 193 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 OR5AL1P0C617 328 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 ZNF22P17026 224 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-208ENST00000537047 CD9P21926 228 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 CSKP41240 450 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 PSG4Q00888 419 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 TOMM34Q15785 309 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-208ENST00000537047 TMEM176BQ3YBM2 270 aaPredicted RBP1.2□□□□□ -2.22
CCDC7-208ENST00000537047 ZNF404Q494X3 552 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 PYCR3Q53H96 274 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 CLLU1OSQ5K130 101 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 LINC00337Q8N6G1 96 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 OR5T3Q8NGG3 340 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 OR2V1Q8NHB1 315 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 MFSD8Q8NHS3 518 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 RNASE11Q8TAA1 199 aaKnown RBP1.2□□□□□ -2.22
CCDC7-208ENST00000537047 LMX1AQ8TE12 382 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 OR8D1Q8WZ84 308 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 QKIQ96PU8 341 aaKnown RBP eCLIP1.2□□□□□ -2.221e-7■■■■■ 31.4
CCDC7-208ENST00000537047 ANAPC13Q9BS18 74 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 COA1Q9GZY4 146 aa1.2□□□□□ -2.22
CCDC7-208ENST00000537047 WDR19Q8NEZ3 1342 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 NCF1BA6NI72 391 aaPredicted RBP1.19□□□□□ -2.22
CCDC7-208ENST00000537047 NCF1CA8MVU1 366 aaPredicted RBP1.19□□□□□ -2.22
CCDC7-208ENST00000537047 F5H5T6 163 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 UPK2O00526 184 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 S1PR2O95136 353 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 GPR75O95800 540 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 SFTPCP11686 197 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 IVDP26440 423 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 TAS2R60P59551 318 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 SLC35B1P78383 322 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 PRDX4Q13162 271 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 HIKESHIQ53FT3 197 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 SPIN4Q56A73 249 aa1.19□□□□□ -2.22
CCDC7-208ENST00000537047 ACSBG2Q5FVE4 666 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms