RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TAF9BQ9HBM6 251 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 LPAR3Q9UBY5 353 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 BOKQ9UMX3 212 aaPredicted RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 LSM5Q9Y4Y9 91 aaKnown RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 ZNF816-ZNF321PA0A0X1KG74 233 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 K7EPK0 472 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 TAAR5O14804 337 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 XRCC2O43543 280 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 MRPL33O75394 65 aaKnown RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 EDN3P14138 238 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 PVALBP20472 110 aaPredicted RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 RPL12P30050 165 aaKnown RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 EIF5AP63241 154 aaKnown RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
LDLR-203ENST00000535915 OR8B8Q15620 311 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 TSPO2Q5TGU0 170 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 ADAMTS17Q8TE56 1095 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 PSMF1Q92530 271 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 MMP26Q9NRE1 261 aa11.39□□□□□ -0.59
LDLR-203ENST00000535915 DNAJC13O75165 2243 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 ZNF587BE7ETH6 402 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 GPR31O00270 319 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 MMP7P09237 267 aaPredicted RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 FCGR2CP31995 323 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 FOXO1Q12778 655 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 MALLQ13021 153 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 TSC22D1Q15714 1073 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 C9orf135Q5VTT2 229 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 TMEM105Q8N8V8 129 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 RTN4IP1Q8WWV3 396 aaPredicted RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 GUCD1Q96NT3 240 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 TUBD1Q9UJT1 453 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 NUDT19A8MXV4 375 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 DEDDO75618 318 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 OR5AC1P0C628 307 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 JMJD7P0C870 316 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 CCNOP22674 350 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 BLOC1S1P78537 153 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 SPEM2Q0P670 501 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 HFEQ30201 348 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 CALHM1Q8IU99 346 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 STRADBQ9C0K7 418 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 TMEM231Q9H6L2 316 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 NAA60Q9H7X0 242 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 ZNF286AQ9HBT8 521 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 IL36GQ9NZH8 169 aa11.38□□□□□ -0.59
LDLR-203ENST00000535915 ZNF629Q9UEG4 869 aaPredicted RBP11.38□□□□□ -0.59
LDLR-203ENST00000535915 LRP3O75074 770 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 PDCD6O75340 191 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 ZXDAP98168 799 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 SVBPQ8N300 66 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 ZNF611Q8N823 705 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 OR4A4PQ8NGN8 299 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 C2CD4CQ8TF44 421 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 TAAR9Q96RI9 348 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 PRRX2Q99811 253 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 C1QTNF5Q9BXJ0 243 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 ZNF442Q9H7R0 627 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 OR7C1O76099 320 aaPredicted RBP11.37□□□□□ -0.59
LDLR-203ENST00000535915 GLI4P10075 376 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 RBM11P57052 281 aaKnown RBP11.37□□□□□ -0.59
LDLR-203ENST00000535915 GUCA2BQ16661 112 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 MST1LQ2TV78 715 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 SLC25A26Q70HW3 274 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 TMEM45BQ96B21 275 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 TECTBQ96PL2 329 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 ZPBPQ9BS86 351 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 SLC7A10Q9NS82 523 aa11.37□□□□□ -0.59
LDLR-203ENST00000535915 A0A096LPE4 126 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 A0A1W2PPZ6 126 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 MED6O75586 246 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 S100A9P06702 114 aaKnown RBP11.36□□□□□ -0.59
LDLR-203ENST00000535915 H2AFB1P0C5Y9 115 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 ARF1P84077 181 aaKnown RBP11.36□□□□□ -0.59
LDLR-203ENST00000535915 PJVKQ0ZLH3 352 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 TMEM187Q14656 261 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 IL34Q6ZMJ4 242 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 PUSL1Q8N0Z8 303 aaKnown RBP11.36□□□□□ -0.59
LDLR-203ENST00000535915 OR2M7Q8NG81 312 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 OR5L1Q8NGL2 311 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 SFT2D1Q8WV19 159 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 WNT2BQ93097 391 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 SAT2Q96F10 170 aaPredicted RBP11.36□□□□□ -0.59
LDLR-203ENST00000535915 SMIM3Q9BZL3 60 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 SLC2A9Q9NRM0 540 aa11.36□□□□□ -0.59
LDLR-203ENST00000535915 FBXL17Q9UF56 701 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms