RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 C12orf49Q9H741 205 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
VPS33B-202ENST00000535906 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 SPRR3Q9UBC9 169 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 PCDHB10Q9UN67 800 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 ST3GAL6Q9Y274 331 aa11.54□□□□□ -0.56
VPS33B-202ENST00000535906 RAB19A4D1S5 217 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 NKX2-8O15522 239 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 RRP8O43159 456 aaKnown RBP11.53□□□□□ -0.56
VPS33B-202ENST00000535906 NGFP01138 241 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 FTH1P19P0C7X4 201 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 OPRM1P35372 400 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 ECI1P42126 302 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF611Q8N823 705 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 OR1S2Q8NGQ3 325 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 MARC2Q969Z3 335 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 CMSS1Q9BQ75 279 aaKnown RBP11.53□□□□□ -0.56
VPS33B-202ENST00000535906 IL36GQ9NZH8 169 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 ANXA10Q9UJ72 324 aa11.53□□□□□ -0.56
VPS33B-202ENST00000535906 TRGV5A0A0B4J1U4 118 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 COX5BP10606 129 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 NPBWR2P48146 333 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 DAZAP2Q15038 168 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-202ENST00000535906 TECTBQ96PL2 329 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 AQP10Q96PS8 301 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF2Q9BSG1 426 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-202ENST00000535906 PAPOLGQ9BWT3 736 aaKnown RBP11.52□□□□□ -0.56
VPS33B-202ENST00000535906 LIME1Q9H400 295 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 TMEM100Q9NV29 134 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 OR5AC2Q9NZP5 309 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF629Q9UEG4 869 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-202ENST00000535906 C14orf166Q9Y224 244 aaKnown RBP11.52□□□□□ -0.56
VPS33B-202ENST00000535906 STARD10Q9Y365 291 aa11.52□□□□□ -0.56
VPS33B-202ENST00000535906 FAM221AA4D161 298 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 KNG1P01042 644 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 FCGR3AP08637 254 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 PET100P0DJ07 73 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 SOX8P57073 446 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 PMP22Q01453 160 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 IL15RAQ13261 267 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 SLC25A26Q70HW3 274 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 POC1AQ8NBT0 407 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 BHLHE23Q8NDY6 225 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 LRRC46Q96FV0 321 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 POM121L2Q96KW2 1035 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-202ENST00000535906 ZDHHC11Q9H8X9 412 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 EDARQ9UNE0 448 aa11.52□□□□□ -0.57
VPS33B-202ENST00000535906 MSGN1A6NI15 193 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 IL18BPO95998 194 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 ARR3P36575 388 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 TNFSF10P50591 281 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 PRDX4Q13162 271 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 HIKESHIQ53FT3 197 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 APOBEC3DQ96AK3 386 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-202ENST00000535906 ASF1BQ9NVP2 202 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF318Q5VUA4 2279 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 SS18L1O75177 396 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF205O95201 554 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 IFNA2P01563 188 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 CD82P27701 267 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 PTGER4P35408 488 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
VPS33B-202ENST00000535906 RAB32Q13637 225 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 MRPL21Q7Z2W9 205 aaKnown RBP11.51□□□□□ -0.57
VPS33B-202ENST00000535906 TMEM178AQ8NBL3 297 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 DECR2Q9NUI1 292 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 DNAJB11Q9UBS4 358 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 MEMO1Q9Y316 297 aa11.51□□□□□ -0.57
VPS33B-202ENST00000535906 PQLC2LA1A4F0 135 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 CDK2AP1O14519 115 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 SIGLEC5O15389 551 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 HOXB5P09067 269 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 OR5H8P0DN80 308 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 DTYMKP23919 212 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 CCL11P51671 97 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 DEFA5Q01523 94 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 BOLLQ8N9W6 283 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 MARS2Q96GW9 593 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 NARS2Q96I59 477 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 ASCL3Q9NQ33 180 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 C12orf4Q9NQ89 552 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 CNOT1A5YKK6 2376 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 NUPL2O15504 423 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 WT1P19544 449 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 RBMXP38159 391 aaKnown RBP11.5□□□□□ -0.57
VPS33B-202ENST00000535906 GPM6AP51674 278 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 MALLQ13021 153 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 FBXW9Q5XUX1 488 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms