RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 STARD10Q9Y365 291 aa10.56□□□□□ -0.72
SCARB1-204ENST00000535005 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
SCARB1-204ENST00000535005 A0A1B0GTI1 187 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 XRCC2O43543 280 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 ZFPL1O95159 310 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 SPDEFO95238 335 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 RLN1P04808 185 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 HEXAP06865 529 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 CD3EP07766 207 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
SCARB1-204ENST00000535005 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM244Q5VVB8 128 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 GLT8D1Q68CQ7 371 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
SCARB1-204ENST00000535005 Q6ZSR3 168 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 ZNF546Q86UE3 836 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 C12orf45Q8N5I9 185 aaPredicted RBP10.55□□□□□ -0.72
SCARB1-204ENST00000535005 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 CCDC54Q8NEL0 328 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 OR5AK2Q8NH90 309 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM138Q9NPI0 162 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 COA4Q9NYJ1 87 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 TNFSF18Q9UNG2 199 aa10.55□□□□□ -0.72
SCARB1-204ENST00000535005 GCN1Q92616 2671 aaKnown RBP10.55□□□□□ -0.72
SCARB1-204ENST00000535005 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 A0A1W2PPK0 400 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM218A2RU14 115 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 GGT3PA6NGU5 568 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 FCER2P06734 321 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 HLA-GP17693 338 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 CCL1P22362 96 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 GLRXP35754 106 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 PPP1CBP62140 327 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 SPOCK1Q08629 439 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 MALLQ13021 153 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 GLYATL3Q5SZD4 288 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 LRRTM1Q86UE6 522 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 OR52B4Q8NGK2 314 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 TSNAXQ99598 290 aaKnown RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 C12orf57Q99622 126 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 STEAP1Q9UHE8 339 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 GTF2A1LQ9UNN4 478 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 PLEKHA6Q9Y2H5 1048 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 HEATR1Q9H583 2144 aaKnown RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 LOC390937A0A1W2PQ73 354 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 SHISA9B4DS77 424 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 SIX6O95475 246 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 ACHEP22303 614 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 MEOX2P50222 304 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 TAS2R19P59542 299 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 ACOT7LQ6ZUV0 252 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 ZNF676Q8N7Q3 588 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM229BQ8NBD8 167 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 OR5M8Q8NGP6 311 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 OR1J1Q8NGS3 322 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 OR51E1Q8TCB6 317 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 MARS2Q96GW9 593 aaKnown RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
SCARB1-204ENST00000535005 COMMD9Q9P000 198 aa10.54□□□□□ -0.72
SCARB1-204ENST00000535005 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
SCARB1-204ENST00000535005 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 RNF222A6NCQ9 220 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 A6NJ64 397 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 P2RY10O00398 339 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 PVALBP20472 110 aaPredicted RBP10.53□□□□□ -0.72
SCARB1-204ENST00000535005 PAX6P26367 422 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 ZNF92Q03936 586 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 DCAF12L2Q5VW00 463 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 SP5Q6BEB4 398 aaPredicted RBP10.53□□□□□ -0.72
SCARB1-204ENST00000535005 ADAM5Q6NVV9 412 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 SLC22A25Q6T423 547 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 DMBX1Q8NFW5 382 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 SLC25A40Q8TBP6 338 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 TMEM171Q8WVE6 324 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 RGP1Q92546 391 aaPredicted RBP10.53□□□□□ -0.72
SCARB1-204ENST00000535005 GCDHQ92947 438 aaPredicted RBP10.53□□□□□ -0.72
SCARB1-204ENST00000535005 PIK3IP1Q96FE7 263 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 REEP6Q96HR9 211 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 LYZL4Q96KX0 146 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 PDCD10Q9BUL8 212 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 POFUT1Q9H488 388 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 ZNF442Q9H7R0 627 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 GPR84Q9NQS5 396 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 HHLA2Q9UM44 414 aa10.53□□□□□ -0.72
SCARB1-204ENST00000535005 PLCE1Q9P212 2302 aa10.52□□□□□ -0.72
SCARB1-204ENST00000535005 FAM221AA4D161 298 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms