RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PRSS44	E7EML9	344 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SEMA7A	O75326	666 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	FGF9	P31371	208 aa	Predicted RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	UBE2M	P61081	183 aa	Known RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ENDOG	Q14249	297 aa	Known RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TGIF2LY	Q8IUE0	185 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TGIF2LX	Q8IUE1	241 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HSD17B10	Q99714	261 aa	Known RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SMLR1	H3BR10	107 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SMIM18	P0DKX4	95 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RPL35	P42766	123 aa	Known RBP	13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF90	Q03938	601 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	DOLPP1	Q86YN1	238 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	UQCC1	Q9NVA1	299 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	FLVCR2	Q9UPI3	526 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF727	A8MUV8	499 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	S100A8	P05109	93 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NGFR	P08138	427 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OR5R1	Q8NH85	324 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	WNT2B	Q93097	391 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	INSIG2	Q9Y5U4	225 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TRIP12	Q14669	1992 aa	Predicted RBP	13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LNP1	A1A4G5	178 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	DBX1	A6NMT0	343 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RHOB	P62745	196 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GGTLC2	Q14390	218 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HAGH	Q16775	308 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF788	Q6ZQV5	615 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	BCL2L2	Q92843	193 aa	Predicted RBP	13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEM74B	Q9NUR3	256 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	BGLAP	P02818	100 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	FAM219B	Q5XKK7	198 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZDHHC22	Q8N966	263 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OR5A2	Q8NGI9	324 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532		A0A0J9YW62	118 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF205	O95201	554 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PLPPR5	Q32ZL2	321 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEM52	Q8NDY8	209 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMED6	Q8WW62	240 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GAB2	Q9UQC2	676 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LIPG	Q9Y5X9	500 aa		13.86	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SCGB1D1	O95968	90 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZBTB37	Q5TC79	503 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RAB40C	Q96S21	281 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TGIF2	Q9GZN2	237 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PLAC1	Q9HBJ0	212 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	UBE2L5P	A0A1B0GUS4	154 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF260	Q3ZCT1	412 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZAR1	Q86SH2	424 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GLCCI1	Q86VQ1	547 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CNTD2	Q9H8S5	307 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LSM2	Q9Y333	95 aa	Known RBP	13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NPIPB8	E9PQR5	432 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	COL5A3	P25940	1745 aa	Predicted RBP	13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MS4A18	H0YCH9	400 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	DUS4L	O95620	317 aa	Known RBP	13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	IGHV3-13	P01766	116 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	IGHV3-7	P01780	117 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PRSS12	P56730	875 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MS4A18	Q3C1V0	323 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TSPO2	Q5TGU0	170 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	FAM122B	Q7Z309	247 aa		13.85	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF320	A2RRD8	509 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532		H0Y8G0	127 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SP6	Q3SY56	376 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PCGF1	Q9BSM1	259 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MSL2	Q9HCI7	577 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NPTN	Q9Y639	398 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HS3ST3B1	Q9Y662	390 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NUBP1	P53384	320 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	EXOSC2	Q13868	293 aa	Known RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PRR27	Q6MZM9	219 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RPUSD4	Q96CM3	377 aa	Known RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMUB1	Q9BVT8	246 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MRM2	Q9UI43	246 aa	Known RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PLXNB2	O15031	1838 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PPP5D1	E7EU14	171 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CELA2A	P08217	269 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SF3B6	Q9Y3B4	125 aa	Known RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF658B	Q4V348	819 aa	Predicted RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RASL12	Q9NYN1	266 aa		13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CISD1	Q9NZ45	108 aa	Known RBP	13.84	□□□□□ -0.19
NCAPD3-213	ENST00000534532	C3orf85	A0A1B0GTC6	90 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532		A0A1W2PQM1	296 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CA11	O75493	328 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CST7	O76096	145 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	IGHA2	P01877	340 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GABRA6	Q16445	453 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PILRA	Q9UKJ1	303 aa		13.83	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RPUSD3	Q6P087	351 aa	Known RBP	13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR5H6	Q8NGV6	325 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PCNP	Q8WW12	178 aa	Known RBP	13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532		A0A0A6YYJ9	748 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532		A0A1W2PR77	199 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	C1QB	P02746	253 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TGFBR1	P36897	503 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms