RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 EDC4Q6P2E9 1401 aaKnown RBP2.87□□□□□ -1.95
CSMD3-210ENST00000534172 IGLON5A6NGN9 336 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SEC14L6B5MCN3 397 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 K7ERU9 68 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CXCR6O00574 342 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 FABP7O15540 132 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MPC2O95563 127 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ETHE1O95571 254 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 IGHG3P01860 377 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MT-ND4LP03901 98 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 IFNW1P05000 195 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 TBPP20226 339 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PRDX3P30048 256 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RPA3P35244 121 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RPL4P36578 427 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 AKR1C3P42330 323 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RPL14P50914 215 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 UBE2MP61081 183 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ERVK-16P61578 105 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RAB31Q13636 194 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 DPYSL3Q14195 570 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PRPSAP1Q14558 356 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZBTB6Q15916 424 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 TAF9Q16594 264 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 UPP1Q16831 310 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PYCR3Q53H96 274 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 AKR1C8PQ5T2L2 129 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF691Q5VV52 312 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 STEAP4Q687X5 459 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CASP12Q6UXS9 341 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 TMED4Q7Z7H5 227 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 METTL13Q8N6R0 699 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR52B6Q8NGF0 335 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR2G2Q8NGZ5 317 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 COQ8AQ8NI60 647 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 UBE2E3Q969T4 207 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RCN3Q96D15 328 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MOCOSQ96EN8 888 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZBED6CLQ96FA7 236 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SMIM8Q96KF7 97 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 FCRL1Q96LA6 429 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PRAP1Q96NZ9 151 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RNF157Q96PX1 679 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR2M2Q96R28 347 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 FAM173AQ9BQD7 235 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MAP1LC3CQ9BXW4 147 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 TBL1XR1Q9BZK7 514 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 BEX1Q9HBH7 125 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 B3GAT2Q9NPZ5 323 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SCRT2Q9NQ03 307 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MIEF1Q9NQG6 463 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR2S2Q9NQN1 319 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SMCO4Q9NRQ5 59 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CUTCQ9NTM9 273 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 VNN3Q9NY84 501 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 DENND4AQ7Z401 1863 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 USP9XQ93008 2570 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RGPD2P0DJD1 1756 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 A0A096LPI6 279 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 A0A1W2PP18 115 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RNF212BA8MTL3 300 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 E7EWF7 191 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 F5H6K3 240 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SNRPCP09234 159 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 BCKDHAP12694 445 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 UCHL3P15374 230 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 IDSP22304 550 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CRHBPP24387 322 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 KDELR1P24390 212 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 IVDP26440 423 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 POLR2IP36954 125 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 EIF5AP63241 154 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MS4A18Q3C1V0 323 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 COX19Q49B96 90 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PIGGQ5H8A4 983 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 C1orf220Q5T0J3 134 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 C10orf91Q5T1B1 145 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 FRRS1Q6ZNA5 592 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF620Q6ZNG0 422 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 LRRTM1Q86UE6 522 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SLC26A11Q86WA9 606 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CRLF3Q8IUI8 442 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZSCAN4Q8NAM6 433 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 DUSP18Q8NEJ0 188 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 NUP37Q8NFH4 326 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PXT1Q8NFP0 134 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR4D9Q8NGE8 314 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 OR10A6Q8NH74 314 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SPPL2BQ8TCT7 592 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 TBCKQ8TEA7 893 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 RNF133Q8WVZ7 376 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 POM121L2Q96KW2 1035 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 JSRP1Q96MG2 331 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ATP5SQ99766 215 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 NICN1Q9BSH3 213 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 PORCNQ9H237 461 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CLMPQ9H6B4 373 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 EML4Q9HC35 981 aaKnown RBP2.86□□□□□ -1.95
CSMD3-210ENST00000534172 SLC2A9Q9NRM0 540 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms