RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SEC61A1P61619 476 aaKnown RBP7.02□□□□□ -1.29
NEDD8-207ENST00000533242 ACTG1P63261 375 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 HIST3H3Q16695 136 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 GFOD2Q3B7J2 385 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 THEM4Q5T1C6 240 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 LIN54Q6MZP7 749 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 ALKAL2Q6UX46 152 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 TMPPEQ6ZT21 453 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 BPIFB2Q8N4F0 458 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 C1orf162Q8NEQ5 155 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-207ENST00000533242 CXorf58Q96LI9 332 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 NARFLQ9H6Q4 476 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 KCNK7Q9Y2U2 307 aa7.02□□□□□ -1.29
NEDD8-207ENST00000533242 IGKV1-9A0A0C4DH69 117 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF716A6NP11 495 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 F5H5P2 479 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 I3L521 148 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 CYB5AP00167 134 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 IFNA7P01567 189 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 IGHV3-9P01782 118 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 IGHG1P01857 330 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 MELTFP08582 738 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 HSD11B1P28845 292 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 DHRS2Q13268 280 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 CDNFQ49AH0 187 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 PLAC9Q5JTB6 97 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ABHD12BQ7Z5M8 362 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ANGPTL5Q86XS5 388 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 CHST4Q8NCG5 386 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SGMS2Q8NHU3 365 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SLC25A43Q8WUT9 341 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 FBXO17Q96EF6 278 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF837Q96EG3 531 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 FAM71F1Q96KD3 344 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF385AQ96PM9 386 aaKnown RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 MICU1Q9BPX6 476 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SELENOIQ9C0D9 397 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 WDR13Q9H1Z4 485 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 GPR84Q9NQS5 396 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 POLR1DQ9Y2S0 133 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 UBE2QL1A1L167 161 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 OR6C65A6NJZ3 312 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 AQP7P3A6NL99 342 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 OR2AT4A6NND4 320 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF878C9JN71 531 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ATP6V1G2-DDX39BF2Z307 99 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 H3BUI4 141 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SULT2B1O00204 365 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SULT1C2O00338 296 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 SOCS1O15524 211 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 RRASP10301 218 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 HRH1P35367 487 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 AP2S1P53680 142 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 CLDN17P56750 224 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 AANATQ16613 207 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 RSPO1Q2MKA7 263 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-207ENST00000533242 TMUB2Q71RG4 321 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 C1QL2Q7Z5L3 287 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 TRAPPC6BQ86SZ2 158 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 NKAIN3Q8N8D7 197 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 OR6X1Q8NH79 312 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ANGPTL6Q8NI99 470 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 LYZL4Q96KX0 146 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF416Q9BWM5 594 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 CST11Q9H112 138 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 LPAR5Q9H1C0 372 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 BANF2Q9H503 90 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 MAB21L2Q9Y586 359 aa7.01□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM14DPA8MWL7 114 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 DNPH1O43598 174 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 MRPL33O75394 65 aaKnown RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 PMS2P2O95744 297 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 CRYZL1O95825 349 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 NMBP08949 121 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF43P17038 809 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 RAB6AP20340 208 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 S100A11P31949 105 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 NTF4P34130 210 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF93P35789 620 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 COMPP49747 757 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 PRSS12P56730 875 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 H3F3AP84243 136 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 SSBP1Q04837 148 aaKnown RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 AWAT2Q6E213 333 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 C11orf88Q6PI97 169 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 KLHL24Q6TFL4 600 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 FAM57BQ71RH2 274 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 COMMD2Q86X83 199 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF584Q8IVC4 421 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 CCDC28AQ8IWP9 274 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 SLC22A24Q8N4F4 322 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 ADAD2Q8NCV1 583 aaKnown RBP7□□□□□ -1.29
NEDD8-207ENST00000533242 OR5D18Q8NGL1 313 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 NPRL2Q8WTW4 380 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 OXGR1Q96P68 337 aa7□□□□□ -1.29
NEDD8-207ENST00000533242 BPESC1Q9GZL8 116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms