RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 TMEM100Q9NV29 134 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 ASF1BQ9NVP2 202 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 FREM1Q5H8C1 2179 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 LOC400499M0QZD8 3231 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 A0A1B0GW55 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 OR7C1O76099 320 aaPredicted RBP13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 SYNGR4O95473 234 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 FAM157CP0CG43 387 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF728P0DKX0 622 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 PLGLB1Q02325 96 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 ATP1A1-AS1Q5TC04 95 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 OR2A2Q6IF42 318 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 LDAHQ9H6V9 325 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 OR2S2Q9NQN1 319 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 ABI3Q9P2A4 366 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 DUX4Q9UBX2 424 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 ATPIF1Q9UII2 106 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 LIPGQ9Y5X9 500 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 R4GN57 208 aa13.21□□□□□ -0.3
CACNA1E-208ENST00000533229 KNTC1P50748 2209 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 TNFSF15O95150 251 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 OR5AC1P0C628 307 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 HKR1P10072 659 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 CD79AP11912 226 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 MALLQ13021 153 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 PRDX4Q13162 271 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 FAM122CQ6P4D5 195 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 RTN4IP1Q8WWV3 396 aaPredicted RBP13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 MARC2Q969Z3 335 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 STARD10Q9Y365 291 aa13.2□□□□□ -0.3
CACNA1E-208ENST00000533229 TOR1AO14656 332 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 SP1P08047 785 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 BCL3P20749 454 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 FUT3P21217 361 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 HAAOP46952 286 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 MEOX1P50221 254 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 GPM6AP51674 278 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 AKR1C2P52895 323 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 RAB1AP62820 205 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 STK11Q15831 433 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 PHLDA2Q53GA4 152 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 HES3Q5TGS1 186 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 OR11L1Q8NGX0 322 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 SLAMF9Q96A28 289 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 APH1AQ96BI3 265 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 IL36RNQ9UBH0 155 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 DNAJB11Q9UBS4 358 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 ARID1AO14497 2285 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 PET100P0DJ07 73 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 SPINK2P20155 84 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 TMEM187Q14656 261 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 Q8NFD4 153 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 PIGMQ9H3S5 423 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 SLC2A9Q9NRM0 540 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
CACNA1E-208ENST00000533229 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 SS18L1O75177 396 aaPredicted RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 ACTL6AO96019 429 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 SRSF3P84103 164 aaKnown RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 LYZL2Q7Z4W2 148 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 LOXL4Q96JB6 756 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 POM121L2Q96KW2 1035 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF286AQ9HBT8 521 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 PRSS50Q9UI38 385 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 MEMO1Q9Y316 297 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF407Q9C0G0 2248 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 NME2P1O60361 137 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 DEDDO75618 318 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 RCC1P18754 421 aaPredicted RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 NME2P22392 152 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 GLYATL2Q8WU03 294 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 AIFM2Q9BRQ8 373 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
CACNA1E-208ENST00000533229 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms