RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 DAPP51397 102 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 TAS2R31P59538 309 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 ERVK11-1P61568 191 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 GNG3P63215 75 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 CRADDP78560 199 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 HSD52Q0P140 79 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 ALKBH6Q3KRA9 238 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 RNASE12Q5GAN4 147 aaKnown RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 TMEM78Q5T7P6 136 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 WDR25Q64LD2 544 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 ACSM6Q6P461 480 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 AGTRAPQ6RW13 159 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 NHLRC1Q6VVB1 395 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 TMEM184AQ6ZMB5 413 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 GLCCI1Q86VQ1 547 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 STPG4Q8N801 248 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 INO80EQ8NBZ0 244 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 OR2Y1Q8NGV0 311 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 OR4C3Q8NH37 302 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 MAFAQ8NHW3 353 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 MBD3L2Q8NHZ7 208 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 FAM110BQ8TC76 370 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 LGALS14Q8TCE9 139 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 FCAMRQ8WWV6 532 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 GEMIN6Q8WXD5 167 aaKnown RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 FAM3CQ92520 227 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 DYRK2Q92630 601 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 PPCDCQ96CD2 204 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 DNAJC19Q96DA6 116 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 COQ2Q96H96 371 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 DGAT2Q96PD7 388 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 MICU1Q9BPX6 476 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 SLC25A33Q9BSK2 321 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 SAMD10Q9BYL1 202 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 STRADBQ9C0K7 418 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 FXYD6Q9H0Q3 95 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 R3HDMLQ9H3Y0 253 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 SLC32A1Q9H598 525 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 Q9N2K0 584 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 KCNJ16Q9NPI9 418 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 PRSS16Q9NQE7 514 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 CLN6Q9NWW5 311 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 COMMD9Q9P000 198 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 SLC23A2Q9UGH3 650 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 NAT8BQ9UHF3 227 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 ZNF107Q9UII5 783 aaPredicted RBP4.77□□□□□ -1.65
CD44-236ENST00000533222 PPIAL4AQ9Y536 164 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 LIPGQ9Y5X9 500 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 EVPLQ92817 2033 aa4.77□□□□□ -1.65
CD44-236ENST00000533222 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 hADV38S2A0JD32 116 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 GXYLT2A0PJZ3 443 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TMEM8BA6NDV4 472 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TLCD2A6NGC4 264 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 LIPT2A6NK58 231 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 FAM220BPB1ANY3 271 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 RFXANKO14593 260 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ERI3O43414 337 aaKnown RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 ZNF207O43670 478 aaKnown RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 CD5LO43866 347 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 SEMA4FO95754 770 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 JCHAINP01591 159 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 HLA-DQB2P05538 268 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ANKRD34CP0C6C1 535 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 PGA3P0DJD8 388 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 GNB3P16520 340 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TNFRSF1BP20333 461 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 SOX3P41225 446 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 CDKN2BP42772 138 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 HMGA2P52926 109 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 FOXG1P55316 489 aaPredicted RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 CLDN15P56746 228 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TAS2R20P59543 309 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 BTG2P78543 158 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 HIST1H1AQ02539 215 aaPredicted RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 ACVR1Q04771 509 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ZP4Q12836 540 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ZNF234Q14588 700 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 PDGFRLQ15198 375 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ZIC1Q15915 447 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 HIST3H3Q16695 136 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ODF4Q2M2E3 257 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 SPANXN3Q5MJ09 141 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 DCAF12L2Q5VW00 463 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 ZFAND6Q6FIF0 208 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TNFAIP8L2Q6P589 184 aaPredicted RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 RICTORQ6R327 1708 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 OPN5Q6U736 354 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 PARS2Q7L3T8 475 aaKnown RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 CPEB2Q7Z5Q1 589 aaKnown RBP4.76□□□□□ -1.65
CD44-236ENST00000533222 CMTM1Q8IZ96 169 aa4.76□□□□□ -1.65
CD44-236ENST00000533222 TCEANCQ8N8B7 351 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms