RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CGGBP1Q9UFW8 167 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-213ENST00000533149 IGHV3OR16-10A0A075B7F0 116 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 ANKRD30BLA7E2S9 258 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 SLC17A2O00624 439 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 MAGEB3O15480 346 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 PAHP00439 452 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 HCKP08631 526 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 OCMP0CE72 109 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 PRKACBP22694 351 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 AZGP1P25311 298 aaKnown RBP9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 CLDN12P56749 244 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 P2RY14Q15391 338 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 RAB11BQ15907 218 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 DDI2Q5TDH0 399 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 RUSC1-AS1Q66K80 236 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 CDH26Q8IXH8 852 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 LINC01006Q8NI28 216 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 ZNF671Q8TAW3 534 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 NPRL2Q8WTW4 380 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 NKX3-1Q99801 234 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 CHIAQ9BZP6 476 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 ABCB9Q9NP78 766 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 TNFRSF19Q9NS68 423 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 ABRACLQ9P1F3 81 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 OR5V1Q9UGF6 321 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 PEX16Q9Y5Y5 336 aa9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 SOX21Q9Y651 276 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-213ENST00000533149 MDFIC2A0A1B0GVS7 189 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 FAM230AA0A1W2PPH8 454 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 A8MXK9 166 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 IQCF6A8MYZ5 107 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 RGS5O15539 181 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM127O75204 238 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 OPN1MWP04001 364 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 OPN1MW2P0DN77 364 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 OPN1MW3P0DN78 364 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 TNFSF8P32971 234 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZNF93P35789 620 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 PROK1P58294 105 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 BPIFB3P59826 476 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 PRDX4Q13162 271 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 DEFB112Q30KQ8 113 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM255AQ5JRV8 349 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 BTNL3Q6UXE8 466 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 LINC00299Q6ZSB3 139 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 BHLHE23Q8NDY6 225 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR5H6Q8NGV6 325 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 TRMT10AQ8TBZ6 339 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 SPSB1Q96BD6 273 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 UPRTQ96BW1 309 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 HIST1H2AAQ96QV6 131 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 PAPOLGQ9BWT3 736 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 EGLN1Q9GZT9 426 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 MIXL1Q9H2W2 232 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 CNTD2Q9H8S5 307 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 PATZ1Q9HBE1 687 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 NEK6Q9HC98 313 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 STEAP1Q9UHE8 339 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 SLC7A11Q9UPY5 501 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 MPC1Q9Y5U8 109 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 POMT1Q9Y6A1 747 aa9.39□□□□□ -0.91
TRAPPC4-213ENST00000533149 HPGDSO60760 199 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 CALCBP10092 127 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 KITLGP21583 273 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 CA6P23280 308 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 HTR2CP28335 458 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 CD80P33681 288 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 S100A5P33763 92 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZNF81P51508 661 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 FUT6P51993 359 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 MTCP1P56278 107 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 KISS1Q15726 138 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 C2orf76Q3KRA6 126 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 Q6YL49 198 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 ANGPTL5Q86XS5 388 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZDHHC23Q8IYP9 409 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 FTMTQ8N4E7 242 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR51D1Q8NGF3 324 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR6M1Q8NGM8 313 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 DYRK2Q92630 601 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 RFT1Q96AA3 541 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 TECTBQ96PL2 329 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 UQCC2Q9BRT2 126 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 LIN7BQ9HAP6 207 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 MRPL15Q9P015 296 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 NPTNQ9Y639 398 aa9.38□□□□□ -0.91
TRAPPC4-213ENST00000533149 TRAV40A0A0B4J280 105 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 TIMM8AO60220 97 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms