RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 C19orf12Q9NSK7 152 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 GEMIN2O14893 280 aaKnown RBP13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 OR2C1O95371 312 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ZBTB25P24278 435 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 DCAF10Q5QP82 559 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF787Q6DD87 383 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 COMMD1Q8N668 190 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 OR4D10Q8NGI6 311 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF519Q8TB69 540 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ANGPTL4Q9BY76 406 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 SHISA3A0PJX4 238 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 TRIM64BA6NI03 449 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 THBS3P49746 956 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 A0A1W2PPH5 198 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF891A8MT65 544 aaPredicted RBP13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 KRASP01116 189 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 RRASP10301 218 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 PPP1CBP62140 327 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 RXFP4Q8TDU9 374 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 NMES1Q9C002 83 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 RNASEK-C17orf49H0YIS7 233 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 TGFBR3LH3BV60 316 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 KLK10O43240 276 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 ADAM20O43506 726 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 MBP02144 154 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 ISG15P05161 165 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 OR2M7Q8NG81 312 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 SDHCQ99643 169 aaPredicted RBP13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 CA10Q9NS85 328 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 MED9Q9NWA0 146 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 FBXL17Q9UF56 701 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 MGAMO43451 1857 aa13.45□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF705FA8MVS1 300 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF705DP0CH99 300 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF705BP0CI00 300 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 COX5AP20674 150 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 MDH2P40926 338 aaKnown RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 IL13RA2Q14627 380 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 COL19A1Q14993 1142 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZFP82Q8N141 532 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 OR2Z1Q8NG97 314 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ACTR3CQ9C0K3 210 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 MMP26Q9NRE1 261 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 IGHV1-45A0A0A0MS14 117 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 A0A0U1RQV5 110 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ONECUT2O95948 504 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 SEZ6L2Q6UXD5 910 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 SLC39A7Q92504 469 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 KLK13Q9UKR3 277 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 HS3ST3B1Q9Y662 390 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 TMEM229AB2RXF0 380 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 H7BYZ3 331 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 RECKO95980 971 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 C3AR1Q16581 482 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 C1orf100Q5SVJ3 147 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 HSD17B13Q7Z5P4 300 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF426Q9BUY5 554 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 SCAF4O95104 1147 aaKnown RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 DTYMKP23919 212 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 CEACAM6P40199 344 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 MIDNQ504T8 468 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 PINX1Q96BK5 328 aaKnown RBP13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ADGRG7Q96K78 797 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 SPSB2Q99619 263 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 SHARPINQ9H0F6 387 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF239Q16600 458 aaKnown RBP13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 RTL8BQ17RB0 113 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 SLC25A47Q6Q0C1 308 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 STARD10Q9Y365 291 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 A0A1W2PNV4 684 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 F6UZH7 168 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 B3GALNT1O75752 331 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 TMPRSS7Q7RTY8 843 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 OR10V1Q8NGI7 309 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 GLRX2Q9NS18 164 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 PILRBQ9UKJ0 227 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 C17orf51A8MQB3 221 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 SOX8P57073 446 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 GUK1Q16774 197 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 SIGIRRQ6IA17 410 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 FDX2Q6P4F2 183 aa13.43□□□□□ -0.26
PCDHA3-202ENST00000532566 POC1BQ8TC44 478 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms