RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 AKAP6Q13023 2319 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 HECTD1Q9ULT8 2610 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A10PA6NDY2 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A18PA6NE21 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A16PA6NEW6 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A20PA6NIJ5 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A8PA6NJQ4 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A7PA6NKC0 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A12PA8MX19 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A5PA8MXJ8 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A23PA8MXZ1 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 LYNX1G3V0Z9 82 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 LDLRAD4O15165 306 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 PPIHO43447 177 aaKnown RBP10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A15PP0C7V4 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A13PP0C7W8 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A14PP0C7W9 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 FAM90A24PP0C7X0 464 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 LYNX1P0DP58 116 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 ZNF182P17025 639 aaPredicted RBP10.47□□□□□ -0.73
COPB1-208ENST00000532088 EGR1P18146 543 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 SOX6P35712 828 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 NPBWR2P48146 333 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
COPB1-208ENST00000532088 SPCS2Q15005 226 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 CLEC12BQ2HXU8 276 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 HES5Q5TA89 166 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 STUMQ69YW2 141 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 OSR2Q8N2R0 312 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 SPICQ8N5J4 248 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 NDNFQ8TB73 568 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 DYNC2LI1Q8TCX1 351 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 EMG1Q92979 244 aaKnown RBP10.47□□□□□ -0.73
COPB1-208ENST00000532088 TMEM165Q9HC07 324 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 DCAF16Q9NXF7 216 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 TREM2Q9NZC2 230 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 DNAJB11Q9UBS4 358 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 GLS2Q9UI32 602 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 DAPK2Q9UIK4 370 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 ETV7Q9Y603 341 aa10.47□□□□□ -0.73
COPB1-208ENST00000532088 SPG11Q96JI7 2443 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 APCP25054 2843 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 TNFRSF13BO14836 293 aaPredicted RBP10.46□□□□□ -0.73
COPB1-208ENST00000532088 IGLV1-40P01703 118 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 PRKACAP17612 351 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 CD80P33681 288 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 NR4A2P43354 598 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 ZMYND11Q15326 602 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 MPV17LQ2QL34 196 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 C2orf76Q3KRA6 126 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 SLC22A6Q4U2R8 563 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 Q5PR19 223 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 DCDC5Q6ZRR9 648 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 KRTAP1-3Q8IUG1 177 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 OR51D1Q8NGF3 324 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 ZNF488Q96MN9 340 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 CMTM3Q96MX0 182 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 TM2D1Q9BX74 207 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 BARHL1Q9BZE3 327 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 WDR13Q9H1Z4 485 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 IFT22Q9H7X7 185 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 ELL3Q9HB65 397 aaPredicted RBP10.46□□□□□ -0.73
COPB1-208ENST00000532088 RBFOX1Q9NWB1 397 aaKnown RBP10.46□□□□□ -0.73
COPB1-208ENST00000532088 RAB22AQ9UL26 194 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 SPATA2Q9UM82 520 aa10.46□□□□□ -0.73
COPB1-208ENST00000532088 OR2AT4A6NND4 320 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 F8VVB4 439 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 F8VWA3 439 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 WNT9BO14905 357 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 HTR3BO95264 441 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 PSG2P11465 335 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 MGMTP16455 207 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 SERPINA2P20848 420 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 LMO1P25800 156 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 CAV3P56539 151 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 RBM11P57052 281 aaKnown RBP10.45□□□□□ -0.74
COPB1-208ENST00000532088 UNC119Q13432 240 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 P2RY14Q15391 338 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 CARTPTQ16568 116 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 IDNKQ5T6J7 187 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 FOXB2Q5VYV0 432 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 CHST4Q8NCG5 386 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 ANGPTL6Q8NI99 470 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 SDSLQ96GA7 329 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 Q96M66 194 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 NKX3-1Q99801 234 aaPredicted RBP10.45□□□□□ -0.74
COPB1-208ENST00000532088 URM1Q9BTM9 101 aaKnown RBP10.45□□□□□ -0.74
COPB1-208ENST00000532088 TMEM59Q9BXS4 323 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 ZNF222Q9UK12 451 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 POLR3KQ9Y2Y1 108 aaPredicted RBP10.45□□□□□ -0.74
COPB1-208ENST00000532088 A3GALT2U3KPV4 340 aa10.45□□□□□ -0.74
COPB1-208ENST00000532088 LRBAP50851 2863 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 TMEM272A0A1B0GTI8 110 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms