RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 M0QZ24 198 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 TIMM23O14925 209 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 MT-ND2P03891 347 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 PRKACAP17612 351 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 COX7A1P24310 79 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 DCKP27707 260 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
C11orf54-210ENST00000531516 PDZK1IP1Q13113 114 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 EDDM3AQ14507 147 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 GRK1Q15835 563 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 AANATQ16613 207 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 LRRC75BQ2VPJ9 315 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 PRR31Q5SQ13 230 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 TRAPPC6BQ86SZ2 158 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 OR13C9Q8NGT0 318 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 ZNF714Q96N38 554 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 SLC29A1Q99808 456 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 VCXQ9H320 206 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 AMBNQ9NP70 447 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 ERVK13-1Q9NX77 482 aa10.28□□□□□ -0.76
C11orf54-210ENST00000531516 IGKV1-27A0A075B6S5 117 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 MGST3O14880 152 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 IGHA1P01876 353 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 TMEM225BP0DP42 221 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 GABRB1P18505 474 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 ARHGDIBP52566 201 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 NANOS3P60323 173 aaKnown RBP10.27□□□□□ -0.77
C11orf54-210ENST00000531516 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
C11orf54-210ENST00000531516 DYNC1I2Q13409 638 aaKnown RBP10.27□□□□□ -0.77
C11orf54-210ENST00000531516 ZNF146Q15072 292 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 CCDC58Q4VC31 144 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 C11orf88Q6PI97 169 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 SAXO1Q8IYX7 474 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 PNKDQ8N490 385 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 PACRGLQ8N7B6 248 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 OR52I1Q8NGK6 324 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 CYGBQ8WWM9 190 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 GPER1Q99527 375 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 SSX3Q99909 188 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 GAL3ST2Q9H3Q3 398 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.77
C11orf54-210ENST00000531516 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
C11orf54-210ENST00000531516 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
C11orf54-210ENST00000531516 ANK2Q01484 3957 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 H3BUX3 64 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 SULT1B1O43704 296 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 ZNF737O75373 536 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 ALX3O95076 343 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 ARG1P05089 322 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 ZNF44P15621 663 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 CCL3L1P16619 93 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 RAB3AP20336 220 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 BCL3P20749 454 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 SNU13P55769 128 aaKnown RBP10.26□□□□□ -0.77
C11orf54-210ENST00000531516 PPP3R1P63098 170 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 TAF9Q16594 264 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 OR52W1Q6IF63 320 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 RPL22L1Q6P5R6 122 aaKnown RBP10.26□□□□□ -0.77
C11orf54-210ENST00000531516 ZNF782Q6ZMW2 699 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-210ENST00000531516 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 OR4C13Q8NGP0 309 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 RFT1Q96AA3 541 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 S100A13Q99584 98 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 PPA2Q9H2U2 334 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 HMG20AQ9NP66 347 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 PCDHB16Q9NRJ7 776 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 AASSQ9UDR5 926 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 PITPNC1Q9UKF7 332 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 MYRFQ9Y2G1 1151 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 GSTK1Q9Y2Q3 226 aa10.26□□□□□ -0.77
C11orf54-210ENST00000531516 EXOSC1Q9Y3B2 195 aaKnown RBP10.26□□□□□ -0.77
C11orf54-210ENST00000531516 TBL2Q9Y4P3 447 aaKnown RBP10.26□□□□□ -0.77
C11orf54-210ENST00000531516 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 IGKV1-9A0A0C4DH69 117 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 E9PQ18 207 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 ZFPL1O95159 310 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 ERP29P30040 261 aaKnown RBP10.25□□□□□ -0.77
C11orf54-210ENST00000531516 GABRA5P31644 462 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 DLX1P56177 255 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 IL18R1Q13478 541 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 ZNF273Q14593 569 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 KISS1Q15726 138 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 LRRC36Q1X8D7 754 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 SATL1Q86VE3 508 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 PARP16Q8N5Y8 322 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 OR51A4Q8NGJ6 313 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 LINC01006Q8NI28 216 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 MALSU1Q96EH3 234 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 PDCD1LG2Q9BQ51 273 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 CHST6Q9GZX3 395 aa10.25□□□□□ -0.77
C11orf54-210ENST00000531516 MEGF9Q9H1U4 602 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms