RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 INSIG2Q9Y5U4 225 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 IGSF9BQ9UPX0 1349 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 LOC102724200A0A096LPH7 203 aaPredicted RBP2.78□□□□□ -1.96
USP47-211ENST00000531513 IGHV3-49A0A0A0MS15 119 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 TMEM72A0PK05 275 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 SLC31A1O15431 190 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 RBFOX2O43251 390 aaKnown RBP eCLIP2.78□□□□□ -1.96
USP47-211ENST00000531513 FGF16O43320 207 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 UGT2B11O75310 529 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 VAMP5O95183 116 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CTDNEP1O95476 244 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 ZNF806P0C7X5 589 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 C1GALT1C1LP0DN25 315 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 PVALBP20472 110 aaPredicted RBP2.78□□□□□ -1.96
USP47-211ENST00000531513 CCL23P55773 120 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 DLX6P56179 175 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 HBG1P69891 147 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 HBG2P69892 147 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 MED21Q13503 144 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 ZNF404Q494X3 552 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CDKL4Q5MAI5 379 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 Q5W150 140 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 AP1ARQ63HQ0 302 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 KCTD16Q68DU8 428 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 MED27Q6P2C8 311 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CLEC18BQ6UXF7 455 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 FAM231DQ6ZW35 169 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 PRNTQ86SH4 94 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 OR10G2Q8NGC3 310 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 ZNF461Q8TAF7 563 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 LINC01560Q8TB33 94 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CCL17Q92583 94 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 RBMXL1Q96E39 390 aaKnown RBP2.78□□□□□ -1.96
USP47-211ENST00000531513 TMEM56Q96MV1 263 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 TBL1YQ9BQ87 522 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CHCHD7Q9BUK0 85 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 TAPBPLQ9BX59 468 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 CA10Q9NS85 328 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 COMMD9Q9P000 198 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 ENOPH1Q9UHY7 261 aa2.78□□□□□ -1.96
USP47-211ENST00000531513 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 ATRXP46100 2492 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 TDRD6O60522 2096 aaKnown RBP2.77□□□□□ -1.97
USP47-211ENST00000531513 PGPA6NDG6 321 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 FTCDNL1E5RQL4 147 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 KLHL2O95198 593 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 CD74P04233 296 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 ADRA2AP08913 450 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 SLC2A1P11166 492 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 IL1RNP18510 177 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 M6PRP20645 277 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 MAGP20916 626 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 ACOT2P49753 483 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 PRDX1Q06830 199 aaKnown RBP2.77□□□□□ -1.97
USP47-211ENST00000531513 LINC00303Q3SY05 128 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 SDHAF4Q5VUM1 108 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 FAM45BPQ6NSW5 357 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 IGFL2Q6UWQ7 119 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 TPGS1Q6ZTW0 290 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 ORMDL3Q8N138 153 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 ZNF420Q8TAQ5 688 aaPredicted RBP2.77□□□□□ -1.97
USP47-211ENST00000531513 DNAJB3Q8WWF6 145 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 CPNE4Q96A23 557 aaPredicted RBP2.77□□□□□ -1.97
USP47-211ENST00000531513 SLC25A46Q96AG3 418 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 FAAP24Q9BTP7 215 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 TSGA10Q9BZW7 698 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 API5Q9BZZ5 524 aaKnown RBP2.77□□□□□ -1.97
USP47-211ENST00000531513 POMKQ9H5K3 350 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 IL20Q9NYY1 176 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 NYAP2Q9P242 653 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 NAGKQ9UJ70 344 aa2.77□□□□□ -1.97
USP47-211ENST00000531513 C2orf16Q68DN1 1984 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 COL16A1Q07092 1604 aaPredicted RBP2.76□□□□□ -1.97
USP47-211ENST00000531513 IGKV1-6A0A0C4DH72 117 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 CENPVL3A0A0U1RRI6 287 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 GOLGA8KD6RF30 607 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 GOLGA8MH3BSY2 632 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 I3L4J1 428 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 PHYHO14832 338 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 FFAR1O14842 300 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 CYTH3O43739 400 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 PDCD6O75340 191 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 ENTPD6O75354 484 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 OR2A4O95047 310 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 IGKV1-39P01597 117 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 HLA-DQB1P01920 261 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 IGKV1D-39P04432 117 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 MRPL3P09001 348 aaKnown RBP2.76□□□□□ -1.97
USP47-211ENST00000531513 BLVRAP53004 296 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 CMC4P56277 68 aaPredicted RBP2.76□□□□□ -1.97
USP47-211ENST00000531513 TAS2R43P59537 309 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 DMC1Q14565 340 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 NANOGP8Q6NSW7 305 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 MORN3Q6PF18 240 aaPredicted RBP2.76□□□□□ -1.97
USP47-211ENST00000531513 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 OR5L1Q8NGL2 311 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 UBALD1Q8TB05 177 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 SYNPRQ8TBG9 265 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 FAM57AQ8TBR7 257 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms