RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 PIGYQ3MUY2 71 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 CELF2-AS1Q8N7Q2 184 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 OR10AD1Q8NGE0 317 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 OCSTAMPQ9BR26 566 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 MSL2Q9HCI7 577 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 IFT46Q9NQC8 304 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 UNC79Q9P2D8 2635 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 hCG_2014768A0A024R1R8 64 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 SIAH2O43255 324 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 NOS1APO75052 506 aaPredicted RBP17.98■□□□□ 0.47
VPS28-212ENST00000530836 PDCD6O75340 191 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 CHATP28329 748 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 SSTR2P30874 369 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 CD200P41217 278 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 IL13RA2Q14627 380 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 PLA1AQ53H76 456 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 LRP11Q86VZ4 500 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 FAM58AQ8N1B3 248 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 SYT3Q9BQG1 590 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 MRPL37Q9BZE1 423 aaKnown RBP17.98■□□□□ 0.47
VPS28-212ENST00000530836 SPACA1Q9HBV2 294 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 NLKQ9UBE8 527 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 POU2F3Q9UKI9 436 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 ATP23Q9Y6H3 246 aa17.98■□□□□ 0.47
VPS28-212ENST00000530836 PTBP3O95758 552 aaKnown RBP17.97■□□□□ 0.47
VPS28-212ENST00000530836 GRPP07492 148 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 FUT3P21217 361 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 BTCP35070 178 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 TLE4Q04727 773 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 MAB21L1Q13394 359 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 BEX5Q5H9J7 111 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 SIGIRRQ6IA17 410 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 NUDCD2Q8WVJ2 157 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 CREB3L1Q96BA8 519 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 CACNG6Q9BXT2 260 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 TAAR3PQ9P1P4 343 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 ELF5Q9UKW6 265 aaPredicted RBP17.97■□□□□ 0.47
VPS28-212ENST00000530836 ZDHHC8Q9ULC8 765 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 ANAPC10Q9UM13 185 aa17.97■□□□□ 0.47
VPS28-212ENST00000530836 NBPF19A0A087WUL8 3843 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 ZNF736B4DX44 427 aaPredicted RBP17.96■□□□□ 0.47
VPS28-212ENST00000530836 F5H5P2 479 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 CDIPTO14735 213 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 MT-ND4P03905 459 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 CD3EP07766 207 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 PGA5P0DJD9 388 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 ERVK11-1P61568 191 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 MRPS15P82914 257 aaKnown RBP17.96■□□□□ 0.47
VPS28-212ENST00000530836 NKAPLQ5M9Q1 402 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 STEAP1BQ6NZ63 245 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 C6orf201Q7Z4U5 140 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 OR2Z1Q8NG97 314 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 EMG1Q92979 244 aaKnown RBP17.96■□□□□ 0.47
VPS28-212ENST00000530836 DIRC2Q96SL1 478 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 MARVELD1Q9BSK0 173 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 NUBP2Q9Y5Y2 271 aa17.96■□□□□ 0.47
VPS28-212ENST00000530836 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.95■□□□□ 0.46
VPS28-212ENST00000530836 MEIS3P1A6NDR6 274 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 SSX5O60225 188 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 RHBDL1O75783 438 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 OR7C1O76099 320 aaPredicted RBP17.95■□□□□ 0.46
VPS28-212ENST00000530836 CD74P04233 296 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 PRKACAP17612 351 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 NAT1P18440 290 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 LOXP28300 417 aaPredicted RBP17.95■□□□□ 0.46
VPS28-212ENST00000530836 MEF2DQ14814 521 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 NKPD1Q17RQ9 610 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 FIP1L1Q6UN15 594 aaKnown RBP17.95■□□□□ 0.46
VPS28-212ENST00000530836 POC1AQ8NBT0 407 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 PLPPR2Q96GM1 343 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 NRIP2Q9BQI9 281 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 IFT22Q9H7X7 185 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 PLEKHA6Q9Y2H5 1048 aa17.95■□□□□ 0.46
VPS28-212ENST00000530836 CD3DP04234 171 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 GLAP06280 429 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 TNFSF4P23510 183 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 GIFP27352 417 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 ACTBL2Q562R1 376 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 PIK3IP1Q96FE7 263 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 ELMOD3Q96FG2 381 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 MMP28Q9H239 520 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 MCUBQ9NWR8 336 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 EDARQ9UNE0 448 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 RAB3DO95716 219 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 TCRBP04435 133 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 ZNF81P51508 661 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 BCAP31P51572 246 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 ADIPOQQ15848 244 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 SPIN3Q5JUX0 258 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 ADAM5Q6NVV9 412 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 OR4C16Q8NGL9 310 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 CHST6Q9GZX3 395 aa17.94■□□□□ 0.46
VPS28-212ENST00000530836 RCC2Q9P258 522 aaKnown RBP17.94■□□□□ 0.46
VPS28-212ENST00000530836 FUOMA2VDF0 154 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 ZSCAN5BA6NJL1 495 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 SHISA9B4DS77 424 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 F8VVB4 439 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 F8VWA3 439 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 OR4A8P0C604 315 aa17.93■□□□□ 0.46
VPS28-212ENST00000530836 DTYMKP23919 212 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms