RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 INO80Q9ULG1 1556 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 A2ML1A8K2U0 1454 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 MLH3Q9UHC1 1453 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 SHANK2Q9UPX8 1470 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 IGHV3OR16-8A0A075B7F1 116 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 LOC102724200A0A096LPH7 203 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 FAM240AA0A1B0GVK7 77 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 GSTTP1A0A1W2PQM5 241 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 OR5K4A6NMS3 321 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 IQCF5A8MTL0 148 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 PRAMEF26H0Y7S4 382 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 GOLGA8MH3BSY2 632 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 PRMT5O14744 637 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 NDUFS5O43920 106 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 ALOX12BO75342 701 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 PAX6P26367 422 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 HTR2CP28335 458 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 MPIP34949 423 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 IDH2P48735 452 aaKnown RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 TUFMP49411 452 aaKnown RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 TPM4P67936 248 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 MAD2L1BPQ15013 274 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 CDNFQ49AH0 187 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 FAM27D1Q5T7N8 215 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 PRR9Q5T870 116 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 ERICH5Q6P6B1 374 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 USP50Q70EL3 339 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 PDPNQ86YL7 162 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 BBS7Q8IWZ6 715 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 ZCCHC24Q8N2G6 241 aaKnown RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 DNAAF3Q8N9W5 541 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 KLF14Q8TD94 323 aaPredicted RBP2.16□□□□□ -2.06
SVIP-203ENST00000529848 ZNF721Q8TF20 911 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 HGDQ93099 445 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 CTRCQ99895 268 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 C9orf16Q9BUW7 83 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 SPZ1Q9BXG8 430 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 ANKHQ9HCJ1 492 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 VCX3AQ9NNX9 186 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 TREM1Q9NP99 234 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 CD300AQ9UGN4 299 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 SLC7A11Q9UPY5 501 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 CDC42BPAQ5VT25 1732 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 DEPDC5O75140 1603 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 ATP7AQ04656 1500 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 CLIP1P30622 1438 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 TRIP11Q15643 1979 aa2.16□□□□□ -2.06
SVIP-203ENST00000529848 STRCP1A6NGW2 1772 aa2.15□□□□□ -2.06
SVIP-203ENST00000529848 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.06
SVIP-203ENST00000529848 COL1A2P08123 1366 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 LRRIQ1Q96JM4 1722 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 TRAV8-7A0A075B6U6 113 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 LOC105371267A0A1B0GV96 52 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 ANKRD20A5PA0PJZ0 165 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 TMEM72A0PK05 275 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 E7EWF7 191 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 MFNGO00587 321 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 RFXANKO14593 260 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 TRAPPC3O43617 180 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 GATCO43716 136 aaKnown RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 HLA-DRAP01903 254 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 CD5P06127 495 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 HLA-GP17693 338 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 RGS6P49758 472 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 POLR2GP62487 172 aaKnown RBP eCLIP2.15□□□□□ -2.07
SVIP-203ENST00000529848 ELF3P78545 371 aaPredicted RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 TAL2Q16559 108 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 TTC32Q5I0X7 151 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 EPGNQ6UW88 154 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 LRRC6Q86X45 466 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 OR6N2Q8NGY6 317 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 OR52N1Q8NH53 320 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 NT5CQ8TCD5 201 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 ZBED3Q96IU2 234 aaPredicted RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 C20orf144Q9BQM9 153 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 TMED9Q9BVK6 235 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 API5Q9BZZ5 524 aaKnown RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 COA1Q9GZY4 146 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 WDR55Q9H6Y2 383 aaPredicted RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 LRRC19Q9H756 370 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 STX18Q9P2W9 335 aaKnown RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 RWDD2AQ9UIY3 292 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 SLC22A14Q9Y267 594 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 WIF1Q9Y5W5 379 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 SYCP2Q9BX26 1530 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 FAM135AQ9P2D6 1515 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 NCOA3Q9Y6Q9 1424 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 ZC3H13Q5T200 1668 aaKnown RBP2.15□□□□□ -2.07
SVIP-203ENST00000529848 ROBO1Q9Y6N7 1651 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 AK9Q5TCS8 1911 aa2.15□□□□□ -2.07
SVIP-203ENST00000529848 XIRP1Q702N8 1843 aaKnown RBP2.14□□□□□ -2.07
SVIP-203ENST00000529848 KIAA1671Q9BY89 1806 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 GPR179Q6PRD1 2367 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 LRRC7Q96NW7 1537 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 KDM5DQ9BY66 1539 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 M0R1B8 84 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 TCAPO15273 167 aa2.14□□□□□ -2.07
SVIP-203ENST00000529848 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms