RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZNF260Q3ZCT1 412 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 C5orf56Q8N8D9 126 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 ZNF596Q8TC21 504 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 NSMCE2Q96MF7 247 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 SPAG4Q9NPE6 437 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 LAMP5Q9UJQ1 280 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 U3KQV3 271 aa14.89□□□□□ -0.03
SSRP1-204ENST00000529002 IGKV1-27A0A075B6S5 117 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 BUB1B-PAK6H3BSN5 160 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 ARPC2O15144 300 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 HAND1O96004 215 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 PEX2P28328 305 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 ARHGDIBP52566 201 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 SNU13P55769 128 aaKnown RBP14.88□□□□□ -0.03
SSRP1-204ENST00000529002 IL24Q13007 206 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 HLA-DRB5Q30154 266 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 CEP19Q96LK0 163 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 NIPSNAP1Q9BPW8 284 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 PKIBQ9C010 78 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 GTF2A1LQ9UNN4 478 aa14.88□□□□□ -0.03
SSRP1-204ENST00000529002 H3BSH0 61 aa14.87□□□□□ -0.03
SSRP1-204ENST00000529002 RTN4RL2Q86UN3 420 aa14.87□□□□□ -0.03
SSRP1-204ENST00000529002 STPG2Q8N412 459 aa14.87□□□□□ -0.03
SSRP1-204ENST00000529002 OR56B4Q8NH76 319 aa14.87□□□□□ -0.03
SSRP1-204ENST00000529002 CITED4Q96RK1 184 aa14.87□□□□□ -0.03
SSRP1-204ENST00000529002 NUFIP1Q9UHK0 495 aaKnown RBP14.87□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A18PA6NE21 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A16PA6NEW6 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A20PA6NIJ5 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 ACOD1A6NK06 481 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A9PA6NNJ1 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A12PA8MX19 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A5PA8MXJ8 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 PRR23D1E9PI22 279 aaPredicted RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 DLGAP1O14490 977 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 MAGEB4O15481 346 aaPredicted RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 MRPL3P09001 348 aaKnown RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FRMD6-AS1P0C7T7 363 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A15PP0C7V4 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A13PP0C7W8 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A14PP0C7W9 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 FAM90A24PP0C7X0 464 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 PRR23D2P0DMB1 279 aaPredicted RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 OR3A1P47881 315 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 SLC35B1P78383 322 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 DIAPH2-AS1Q14236 149 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 PLEKHG7Q6ZR37 379 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 SLC35E3Q7Z769 313 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 CPOQ8IVL8 374 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 OR14K1Q8NGZ2 314 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 TEX47Q8TBZ9 253 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 EMG1Q92979 244 aaKnown RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 DGCR6LQ9BY27 220 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 DNAJB9Q9UBS3 223 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 MAGEL2Q9UJ55 1249 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 COPS3Q9UNS2 423 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 UBE2J1Q9Y385 318 aaPredicted RBP14.86□□□□□ -0.03
SSRP1-204ENST00000529002 V9GYS6 101 aa14.86□□□□□ -0.03
SSRP1-204ENST00000529002 A0A1B0GTI1 187 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 TOR1AO14656 332 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 FAM106CPP0CH98 169 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 NPBWR2P48146 333 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 P2RX3P56373 397 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 RPS7P62081 194 aaKnown RBP14.85□□□□□ -0.03
SSRP1-204ENST00000529002 ZNF91Q05481 1191 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 HES1Q14469 280 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 KIR2DS1Q14954 304 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 OR52W1Q6IF63 320 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 HEPN1Q6WQI6 88 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 SLC25A26Q70HW3 274 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 COMMD1Q8N668 190 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 DRAM1Q8N682 238 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 OR8U1Q8NH10 309 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 RBFOX1Q9NWB1 397 aaKnown RBP14.85□□□□□ -0.03
SSRP1-204ENST00000529002 ING3Q9NXR8 418 aa14.85□□□□□ -0.03
SSRP1-204ENST00000529002 H3BN98 237 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 SIRPB1O00241 398 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 IGHV3-7P01780 117 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 IGHG2P01859 326 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 TMEM11P17152 192 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 CD34P28906 385 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 CEACAM3P40198 252 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 MNDAP41218 407 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 GLIPR1P48060 266 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 MICAQ29983 383 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 LCN1P1Q5VSP4 162 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 MROQ9BYG7 248 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 SLC7A11Q9UPY5 501 aa14.84□□□□□ -0.03
SSRP1-204ENST00000529002 MGST3O14880 152 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 SRSF10O75494 262 aaKnown RBP14.83□□□□□ -0.04
SSRP1-204ENST00000529002 HSD17B1P14061 328 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 SLC2A5P22732 501 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 UBE2V2Q15819 145 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 SLX4IPQ5VYV7 408 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 TEX38Q6PEX7 206 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 C16orf89Q6UX73 402 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 THNSL2Q86YJ6 484 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 TOMM40LQ969M1 308 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 IKZF2Q9UKS7 526 aa14.83□□□□□ -0.04
SSRP1-204ENST00000529002 TRGV10A0A0A0MS01 117 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms