RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PATZ1Q9HBE1 687 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 TREM2Q9NZC2 230 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 MTCH1Q9NZJ7 389 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 CLN8Q9UBY8 286 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 OR5V1Q9UGF6 321 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 DAPK2Q9UIK4 370 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 ABCA12Q86UK0 2595 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 HECTD1Q9ULT8 2610 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 APCP25054 2843 aa6.66□□□□□ -1.34
SSBP3-211ENST00000528787 ASH1LQ9NR48 2969 aaKnown RBP6.66□□□□□ -1.34
SSBP3-211ENST00000528787 IGKV1-27A0A075B6S5 117 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 PPIAL4CA0A0B4J2A2 164 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 SERPINE3A8MV23 424 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 VWC2LB2RUY7 222 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 B4DSR2 109 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 C3orf80F5H4A9 247 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 H3BMQ9 156 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 MGST3O14880 152 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 SIGLEC5O15389 551 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ADAM20O43506 726 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 RHBDL1O75783 438 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 CLPXO76031 633 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 OR7C1O76099 320 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 CYB5R3P00387 301 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 APOA1P02647 267 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 CSN2P05814 226 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 FOSL1P15407 271 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ZNF44P15621 663 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ADRA2CP18825 462 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 BCL3P20749 454 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 FUT3P21217 361 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 LMO1P25800 156 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 PRDX2P32119 198 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 RPS19P39019 145 aaKnown RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 MNDAP41218 407 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 PITPNBP48739 271 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 NCS1P62166 190 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 RPS27AP62979 156 aaKnown RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 HNRNPA0Q13151 305 aaKnown RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 IKZF1Q13422 519 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 INSL4Q14641 139 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ZMYND11Q15326 602 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 C2orf76Q3KRA6 126 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 UBE2NLQ5JXB2 153 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 HES5Q5TA89 166 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 STUMQ69YW2 141 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 HIST2H2BCQ6DN03 193 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ASPHD2Q6ICH7 369 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 FAM166AQ6J272 317 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 BTNL3Q6UXE8 466 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 LINC00299Q6ZSB3 139 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 SLC16A12Q6ZSM3 486 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ZNF826PQ6ZT77 177 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 LYPD6Q86Y78 171 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 CMTM4Q8IZR5 234 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ZNF565Q8N9K5 539 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 OR4D6Q8NGJ1 314 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 ANGPTL6Q8NI99 470 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 NRGNQ92686 78 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 YIPF5Q969M3 257 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 RFT1Q96AA3 541 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 SSBP3Q9BWW4 388 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 TM2D1Q9BX74 207 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 SELENOIQ9C0D9 397 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 BPESC1Q9GZL8 116 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 PPIL3Q9H2H8 161 aaKnown RBP6.65□□□□□ -1.34
SSBP3-211ENST00000528787 MMP27Q9H306 513 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 TMEM165Q9HC07 324 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 HSF4Q9ULV5 492 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 PEX16Q9Y5Y5 336 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 CEPT1Q9Y6K0 416 aa6.65□□□□□ -1.34
SSBP3-211ENST00000528787 A0A075B6Q4 140 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 RFPL4AA6NLU0 287 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM14DPA8MWL7 114 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 RFPL4AL1F8VTS6 287 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ENSAO43768 121 aaKnown RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ANGPTL7O43827 346 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 PDCD6O75340 191 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 MPIG6BO95866 241 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 PSG2P11465 335 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ERP29P30040 261 aaKnown RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 PAX5Q02548 391 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 MEF2CQ06413 473 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM30BQ3MIR4 351 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 PAN3Q58A45 887 aaKnown RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ATAD3CQ5T2N8 411 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 SFRP4Q6FHJ7 346 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 SPNS3Q6ZMD2 512 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF788Q6ZQV5 615 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 MOB1BQ7L9L4 216 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF554Q86TJ5 538 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 OR8H2Q8N162 312 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 ASCC1Q8N9N2 400 aaKnown RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 OR51D1Q8NGF3 324 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 NEK7Q8TDX7 302 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 Q96M66 194 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 Q96MF0 132 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM246Q9BRR3 403 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 REG4Q9BYZ8 158 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 PLEKHJ1Q9NW61 149 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms