RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 C3P1Q6ZMU1 363 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 RFPL4BQ6ZWI9 263 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.15□□□□□ -0.78
USF1-208ENST00000528768 TMEM185AQ8NFB2 350 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 OR5AP2Q8NGF4 316 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 OR5L1Q8NGL2 311 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 OR2AE1Q8NHA4 323 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 FNDC9Q8TBE3 224 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 ST8SIA4Q92187 359 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 PIGCQ92535 297 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 Q96M66 194 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 ST6GALNAC5Q9BVH7 336 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 FXYD6Q9H0Q3 95 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 TMEM165Q9HC07 324 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 SH3BGRL2Q9UJC5 107 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 MEMO1Q9Y316 297 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 PHF3Q92576 2039 aaKnown RBP10.15□□□□□ -0.78
USF1-208ENST00000528768 LOC100509620A0A075B734 347 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ANKRD34BA5PLL1 514 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 SLC22A20A6NK97 555 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CEACAM18A8MTB9 384 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 FOXI3A8MTJ6 420 aaPredicted RBP10.14□□□□□ -0.79
USF1-208ENST00000528768 SIX6O95475 246 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CD8AP01732 235 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 PATE4P0C8F1 98 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CD79AP11912 226 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 RPA2P15927 270 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 AKR1C4P17516 323 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 GABRR1P24046 479 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ACKR3P25106 362 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 MPGP29372 298 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 APLNRP35414 380 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 H2BFSP57053 126 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ZNF92Q03936 586 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CLLU1Q5K131 121 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 TMEM65Q6PI78 240 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 GSG1LQ6UXU4 331 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 COLCA1Q6ZS62 124 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CCDC36Q8IYA8 594 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 SAXO1Q8IYX7 474 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 OSR2Q8N2R0 312 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 OR10K1Q8NGX5 313 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 THAP6Q8TBB0 222 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 MARCH1Q8TCQ1 289 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 CA5BP1Q8WTZ4 195 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 EMG1Q92979 244 aaKnown RBP10.14□□□□□ -0.79
USF1-208ENST00000528768 DHRS9Q9BPW9 319 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ZNF701Q9NV72 531 aaPredicted RBP10.14□□□□□ -0.79
USF1-208ENST00000528768 EHFQ9NZC4 300 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 GPR132Q9UNW8 380 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ZNF835Q9Y2P0 537 aa10.14□□□□□ -0.79
USF1-208ENST00000528768 ABCA4P78363 2273 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 A0A1W2PP11 408 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 LINC00862A6NCI5 91 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A10PA6NDY2 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A18PA6NE21 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A16PA6NEW6 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A20PA6NIJ5 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A8PA6NJQ4 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A7PA6NKC0 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A22PA8MWA6 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A12PA8MX19 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A5PA8MXJ8 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A23PA8MXZ1 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 G3V3Q6 166 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 ARPC5O15511 151 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 RAD51DO75771 328 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 SFT2D2O95562 160 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 CST4P01036 141 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 IGHV3-9P01782 118 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A15PP0C7V4 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A13PP0C7W8 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A14PP0C7W9 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 FAM90A24PP0C7X0 464 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 SLC25A4P12235 298 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 PGAM2P15259 253 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
USF1-208ENST00000528768 AP2S1P53680 142 aaPredicted RBP10.13□□□□□ -0.79
USF1-208ENST00000528768 SORDQ00796 357 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 TGFBR3Q03167 851 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 PDZK1IP1Q13113 114 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 PPP1R1AQ13522 171 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 C3AR1Q16581 482 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 RNF144BQ7Z419 303 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 C1QL2Q7Z5L3 287 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 CMSS1Q9BQ75 279 aaKnown RBP10.13□□□□□ -0.79
USF1-208ENST00000528768 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 ARL6Q9H0F7 186 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 DEFB127Q9H1M4 99 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 HEXA-AS1Q9H8Q6 139 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 COQ3Q9NZJ6 369 aa10.13□□□□□ -0.79
USF1-208ENST00000528768 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
USF1-208ENST00000528768 FLNAP21333 2647 aaKnown RBP10.12□□□□□ -0.79
USF1-208ENST00000528768 C5orf49A4QMS7 147 aa10.12□□□□□ -0.79
USF1-208ENST00000528768 C5orf51A6NDU8 294 aa10.12□□□□□ -0.79
USF1-208ENST00000528768 OR5H14A6NHG9 310 aa10.12□□□□□ -0.79
USF1-208ENST00000528768 FIGNL2A6NMB9 653 aa10.12□□□□□ -0.79
USF1-208ENST00000528768 OR2AT4A6NND4 320 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms